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Creator: Sebastian Curth
Submitter: Sebastian Curth
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Creator: Sebastian Curth
Submitter: Sebastian Curth
Simulation results of temperature degradation of gluconeogenic intermediates
Creators: Jacky Snoep, Theresa Kouril
Submitter: Jacky Snoep
Experimental data for determination of half-life of gluconeogenic intermediates (BPG, GAP and DHAP).
Creators: Jacky Snoep, Theresa Kouril
Submitter: Jacky Snoep
MIAPE based Gel Electrophoresis Data Entry Worksheet
Creators: Olga Krebs, Holger Janssen
Submitter: Olga Krebs
Recent studies revealed the unsuspected complexity of the bacterial transcriptome but its systematic analysis across many diverse conditions remains a challenge. Here we report the condition-dependent transcriptome of the prototype strain B. subtilis 168 across 104 conditions reflecting the bacterium's life-styles. This data set composed of 269 tiling array hybridizations allowed to observe ~85% of the annotated CDSs expressed in the higher 30% in at least one hybridization and thus provide an ...
Creators: Leif Steil, Ulrike Mäder, Colin Harwood, Rick Lewis, Ruben Mars, Priyanka Nannapaneni, Praveen kumar Sappa, Joerg Stuelke, Jan Maarten van Dijl, Michael Hecker, Uwe Voelker
Submitter: Leif Steil
Heterologous Expression of LDHs from different lactic acid bacteria in Escherichia coli DH5α.
Assessment of kinetic parameters of LDH to include in a catabolic model.
Creators: Silvio Hering, Tomas Fiedler
Submitter: Silvio Hering
TOK1 TRK1 TRK2
Creator: Silvia Petrezselyova
Submitter: The JERM Harvester
How to get to the hotel from rail station
Creator: Olga Krebs
Submitter: Olga Krebs
Creator: Sebastian Curth
Submitter: Sebastian Curth
Kinetic characterisation of TPI. Experimental data for enzyme reaction rates with increasing concentrations of DHAP and GAP, and inhibition with 3PG and PEP.
Creators: Jacky Snoep, Theresa Kouril
Submitter: Jacky Snoep
Simulation results of TPI experimental data for GAP and DHAP saturation.
Creators: Jacky Snoep, Theresa Kouril
Submitter: Jacky Snoep
Creator: Praveen kumar Sappa
Submitter: The JERM Harvester
Creators: Ulrike Mäder, Joerg Stuelke, Praveen kumar Sappa, Martin Lehnik-Habrink, Marc Schaffer
Submitter: Praveen kumar Sappa
Mutants with defects in glucose transport systems were analyzed in a bioreactor and the transcription of certain uptake systems analyzed. Transcription profiles between batch and chemostat conditions were compared
Creator: Sonja Steinsiek
Submitter: Sonja Steinsiek
Transcription of glucose uptake transport systems in a mutant background under aerobic batch conditions.
Creator: Sonja Steinsiek
Submitter: Sonja Steinsiek
Transcription of glucose uptake transport systems in a mutant background under anaerobic batch conditions.
Creator: Sonja Steinsiek
Submitter: Sonja Steinsiek
Micro array analysis of steady-state growing cells of Clostridium acetobutylicum at pH 5.7 (acidogenesis) in comparison to pH 4.5 (solventogenesis).
Creator: Holger Janssen
Submitter: Holger Janssen
Micro array analyses of all mRNA levels of cells growing at steady state pH values 5.7, 5.5, 5.3, 5.1, 4.9, 4.7 compared to the same reference steady-state pH 4.5.
Creator: Holger Janssen
Submitter: Holger Janssen
This template is for recording gene expression data from the NimbleGen platform. This template was taken from the GEO website (http://www.ncbi.nlm.nih.gov/geo/info/spreadsheet.html) and modified to conform to the SysMO-JERM (Just enough Results Model) for transcriptomics. Using these templates will mean easier submission to GEO/ArrayExpress and greater consistency of data in SEEK.
Creator: Katy Wolstencroft
Submitter: Katy Wolstencroft
An example template for MAGE-TAB compliant transcriptomics data. This example only covers the Investigation Description Format (IDF) and the Sample and Data Relationship Format (SDRF) worksheets (i.e. the metadata from a microarray experiment). This template was generated automatically using the ArrayExpress submission help tool (http://www.ebi.ac.uk/cgi-bin/microarray/magetab.cgi)
Creators: Katy Wolstencroft, Olga Krebs
Submitter: Katy Wolstencroft
Please fill in thistravel expense reimbursement report and send it together with original receipts to HITS
Creator: Olga Krebs
Submitter: Olga Krebs
TRK1, TRK2
Creator: Silvia Petrezselyova
Submitter: The JERM Harvester
All datapoints that were measured are displayed together with the accompanying simulations by the computational model
Creators: Jurgen Haanstra, Alejandro Leroux
Submitter: Jurgen Haanstra
An extended model description of the TryS model
Creators: Jurgen Haanstra, Alejandro Leroux
Submitter: Jurgen Haanstra