Proteomics Template (gel electrophoresis)
Examples of proteomics templates for gele electrophoresis data that conform to the MIAPE-GE specification
FAIRDOMHub ID: https://seek.sysmo-db.org/assays/154
Experimental Assay
Projects: SysMO DB
Investigation: Creating data sheet template for 'omics data
Study: Creating templates for proteomics
Assay type: Proteomics
Technology type: Electrophoresis
Organisms:
Contributor and Creators
Views: 1069
Created: 7th Mar 2012 at 15:47
Last updated: 14th Nov 2012 at 11:56
Related items
Projects: SysMO DB, HUMET Startup, FAIRDOM
Institutions: University of Leiden
I am an Assistant Professor at Leiden University in the Leiden Institute of Advanced Computer Science. I am a bioinformatician and my research interests are in data integration. I use scientific workflows and semantic web technologies to integrate and analyse data in systems biology and functional genomics.
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
* facilitates and maximises the potential for data exchange between SysMO research groups;
* maximises the ‘shelf life’ and
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Programme: SysMO
Public web page: http://www.sysmo-db.org/
This investigation contains spreadsheet templates and examples for SEEK users to download and use for structuring experimental data. These templates were developed by the SysMO-DB team and the SysMO PALs
Studies: Creating Templates for Proteomics, Creating Templates for Transcriptomics, Creating template for metabolomics data
Here you will find guidelines for creating MIAPE compliant proteomics data files as well as examples and links to online tools and resources
Person responsible: Katy Wolstencroft
Assays: Proteomics Template (gel electrophoresis), Proteomics Templates (Mass spectrometry)
MIAPE based Gel Electrophoresis Data Entry Worksheet
Creators: Olga Krebs, Holger Janssen
Contributor: Olga Krebs
Relationship type: Not specified
DownloadThis template is a JERM compliant spreadsheet for use with gel electrophoresis data. It is in the style of the JERM MASTER template with worksheets for metadata, organism_sample, instrument and data. To conform to MIAPE-GE all worksheets are mandatory.
A detailed description of MIAPE-GE is available from http://www.psidev.info/miape/MIAPE_GE_1_4.pdf
Creator: Katy Wolstencroft
Contributor: Katy Wolstencroft
Relationship type: Not specified
