The workshop focuses on the publication, curation, retrieval, and usage of kinetic data from the reaction kinetics database SABIO-RK and on the use of data in modeling. There will be experience reports from scientists who successfully used experimental data to formulate or verify biological hypotheses with the computer, and you will experience how experimental data can be used with computational models.
FAIRDOMHub ID: https://seek.sysmo-db.org/projects/49
Public web page: http://www.h-its.org/event/kinetics-on-the-move/
FAIRDOM PALs: No PALs for this Project
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I'm a biologist working in the field of scientific datases as a biocurator.
Projects: Kinetics on the move - Workshop 2016
Research associate at HITS, software developer
Software developer for FAIRDOM
Projects: SysMO DB, FAIRDOM, ICYSB 2015 - International Practical Course in Systems Biology, ZucAt, SysMO-LAB, Kinetics on the move - Workshop 2016, Example use cases, FAIRDOM user meeting, ErasysApp Funders, Glycon proposal preparation, Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW)
I am a researcher at the Scientific Databases and Visualization Group at Heidelberg Institute for Theoretical Studies (HITS) , one of the developers of SabioRK - System for the Analysis of Biochemical Pathways - Reaction Kinetics (http://sabiork.h-its.org/) . I am working on design and maintenance of the information systems to store, query and analyse systems biology data; definition and implementation of methods for the integration of data from multiple sources. In SySMO-DB project
Disciplines: Not specified
Roles: Not specified
Expertise: Not specified
Tools: Not specified
Projects: FAIRDOM, Early Metabolic Injury (LiSyM-EMI - Pillar I), Chronic Liver Disease Progression (LiSyM-DP - Pillar II), Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III), LiSyM Core Infrastructure and Management (LiSyM-PD), Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV), Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP), Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF), The Hedgehog Signalling Pathway (LiSyM-JGMMS), Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM), Kinetics on the move - Workshop 2016, Example use cases, FAIRDOM user meeting, MS_DILI
Data management and standardization expert for systems biology and systems medicine, responsible for the data management user requirements and user contacts within the German LiSyM network (Liver Systems Medicine: http://lisym.org/) and associated to the FAIRDOM team.
Involved in different standardization initiatives and committees, i.e. COMBINE (http://co.mbine.org), ISO/TC 276 Biotechnology (https://www.iso.org/committee/4514241.html), European COST action CHARME (http://www.cost-charme.eu) and
Author: Matthias König
Date Published: 2016
Citation: F1000Res 5 : 1736
Author: Crouch Thomas H.,Klee Claude B.
Date Published: 1st Aug 1980
Citation: Biochemistry 19(16) : 3692
Authors: Antoine Buetti-Dinh, Dethlefsen Olga,Friedman Ran,Dopson Mark
Date Published: 26th May 2016
Journal: Not specified
Citation: Transcriptomic analysis reveals how a lack of potassium ions increases Sulfolobus acidocaldarius sensitivity to pH changes
Author: Hirose Y.,Kaida H.,Kawahara A.,Matono S.,Tanaka T.,Kurata S.,Kage M.,Ishibashi M.,Abe T.
Date Published: 25th May 2016
Journal: Nucl Med Commun
PubMed ID: 27218430
Citation: Nucl Med Commun. 2016 May 23.
Authors: Melanie Stefan, Edelstein S. J.,Le Novere N.
Date Published: 31st Jul 2008
Journal: Proc Natl Acad Sci U S A
PubMed ID: 18669651
Citation: Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10768-73. doi: 10.1073/pnas.0804672105. Epub 2008 Jul 31.
Author: Tyson J. J.
Date Published: 15th Aug 1991
Journal: Proc Natl Acad Sci U S A
PubMed ID: 1831270
Citation: Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7328-32.