Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - third experiment
Version 1

LightningSimulate Model on JWS BuildDownload

An ODE model representing the metabolic network governing acid and solvent production by Clostridium acetobutylicum (Haus et al. BMC Systems Biology 2011, 5:10), incorporating the effect of pH upon gene regulation and subsequent end-product levels. This model describes the third of four experiments in which the pH of the culture was shifted. For this experiment acidogenesis at pH 5.7 was maintained for 121 hours, after which the pH control was stopped, allowing the natural metabolic shift to the production of the solvents to begin.

Simulation link for JWS Online: http://jjj.mib.ac.uk/webMathematica/Examples/run.jsp?modelName=haus3

SEEK ID: https://fairdomhub.org/models/57?version=1

1 item is associated with this Model:
  • haus3.dat (uuencoded file - 2.5 KB) Download

Organism: Clostridium acetobutylicum

Model type: Ordinary differential equations (ODE)

Model format: Not specified

Execution or visualisation environment: JWS Online

Model image: No image specified

help Contributor and Creators
No license specified

Views: 2497   Downloads: 135

Created: 12th Oct 2011 at 12:05

Last updated: 7th Mar 2012 at 13:49

Last used: 20th Jan 2019 at 15:37

help Attributions


Related items

Powered by
Seek new full
Copyright © 2008 - 2019 The University of Manchester and HITS gGmbH