At_Pokh2011_LD_degr_Op1Ap3.xml - PLM_67, version 5

Andrew's "ongoing work" record for the P2011 clock model. Many different versions, with annotations made during SBSI development in 2011-2013 - see version records.

Version Comments


Derived from PLM_67v3 - LDLL transition at 314h, with wider parameter ranges, as used in LDLL_run2 - but with one modification in Copasi, to cL_m degradation to ensure light rate > dark rate. Value of m1 previously 0.54, now 0.3. Simulation in Copasi was identical.



Copasi file also attached.




Originally submitted to PLaSMo on 2012-05-31 22:18:27

SEEK ID: https://fairdomhub.org/assays/849

Modelling Analysis

BioData SynthSys

Projects: Millar group, PlaSMo model repository

Investigation: Millar, Andrew (ex-PlaSMo models)

Study: At_Pokh2011_LD_degr_Op1Ap3.xml - PLM_67

Biological problem addressed: Gene Regulatory Network

Organisms: No organisms

Models:
Data:
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Andrew Millar
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Created: 10th Jan 2019 at 17:40

Last updated: 22nd Jan 2019 at 18:19

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