Selected Cell
Cell:
Value:
array design
experiment_sample
data sheet
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Array design description | |||||||||
FORMAT | |||||||||
ARRAYBATCH | Simon Rasmussen, Henrik Bjørn Nielsen and Hanne Jarmer*. (2009) The transcriptionally active regions in the genome of Bacillus subtilis, Molecular Microbiology, 73, 1043–1057 | The array design specification consists of the description of the common features of the array as the whole, and the description of each array design elements (e.g., each spot). Following terminology used in MAGE, we distinguish between three levels of array design elements: feature - the location on the array, reporter - the nucleotide sequence present in a particular location on the array, and composite sequence - a set of reporters used collectively to measure an expression of a particular gene, exon, or splice-variant. The details that should be given of each of them are described below. | |||||||
ARRAYBATCHNAME | Tiling Array | * array design name | |||||||
ARRAYTYPE | Nimblegen | * platform type: in situ synthesized, spotted or other | |||||||
SPOTPARAMID | BaSysBio Bacillus subtilis T1385K array version 1’ | database ID | |||||||
NUMBERBLOCKSPERCHIP | * physical dimensions of array support (e.g. of slide) | ||||||||
NUMBERBLOCKSHORIZ | 385000 | * number of features on the array | |||||||
NUMBERBLOCKSVERTIC | |||||||||
NUMBERROWSINBLOCK | |||||||||
NUMBERCOLUMNSINBLOCK | date of production | ||||||||
SPOTTINGDATE | |||||||||
COMMENTS | something like surface and coating specification etc | ||||||||
PROVIDERID | Nimblegen | * availability (e.g., for commercial arrays) or production protocol for custom made arrays | |||||||
ARRAY | single array of certain array batch | ||||||||
ARRAYID | SOM03GN9 - SN: 1=M9_Glu_OD=0.4_Repl_2 | ||||||||
SOM03GNE - SN: 2=M9_Glu_OD=1.0_Repl_2 | |||||||||
SOM03GNC - SN: 3=M9_Glu_OD=1.4_Repl_2 | |||||||||
SOM03GND - SN: 4=M9_Glu_OD=0.4_Repl_1 | |||||||||
SOM03GNF - SN: 5=M9_Glu_OD=1.0_Repl_1 | |||||||||
SOM03GNG - SN: 6=M9_Glu_OD=1.5_Repl_1 | |||||||||
SOM03GNH - SN: 7=M9_Glu_OD=0.4_Repl_3 | |||||||||
SOM03GNJ - SN: 8=M9_Glu_OD=1.0_Repl_3 | |||||||||
SOM03GNK - SN: 9=M9_Glu_OD=1.5_Repl_3 | |||||||||
ARRAYBATCHID | |||||||||
SUPPORTID | |||||||||
COMMENTARE | |||||||||
SLIDE_NB | |||||||||
REPORTER | oligo/sequence on array , related information, common for all arrays in one batch | ||||||||
RPROBEID | database ID | ||||||||
SPOTPARAMID | database ID, foreign key to arraybatch | ||||||||
TYPE | synthetic oligo-nucleotides | * the type of the reporter: synthetic oligo-nucleotides, PCR products, plasmids, colonies, other | |||||||
STRAND | single stranded | * single or double stranded | |||||||
SEQUENCE | |||||||||
LENGHT | Simon Rasmussen, Henrik Bjørn Nielsen and Hanne Jarmer*. (2009) The transcriptionally active regions in the genome of Bacillus subtilis, Molecular Microbiology, 73, 1043–1057 | * approximate lengths if exact sequence not known | |||||||
PROBETYPE | oligo, cDNA etc | ||||||||
ACC NUMBER | * gene name and links to appropriate databases (e.g., SWISS-PROT, or organism specific databases), if known and relevant | ||||||||
PROVIDER | |||||||||
PROVIDERID | o sequence accession number in DDBJ/EMBL/GenBank, if exists | ||||||||
ORGANISM | NCBI Accession number | ||||||||
CHROMOSOMENR | |||||||||
CHROM_BAND | |||||||||
SYMBOL | standartized name of gene | ||||||||
PLASMIDNR | |||||||||
SYMBOL | |||||||||
AMPLIFICATIONPROTOCOLID | database ID, foreign key to amplification protokol (separate) | ||||||||
PURIFICATIONPROTOCOLID | database ID, foreign key to purification protokol (separate) | ||||||||
PRODUCTIONDATE | |||||||||
DNAYIELD | amount of DNA on the spot | ||||||||
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Name | Locus_tag | M9exp_1 | M9exp_2 | M9exp_3 | M9tran_1 | M9tran_2 | M9tran_3 | M9stat_1 | M9stat_2 | M9stat_3 | |||||||||
NA | BSU_misc_RNA_1 | 14.8383 | 14.9294 | 14.5082 | 13.9014 | 14.2086 | 14.473 | 12.4199 | 11.8477 | 11.5341 | |||||||||
NA | BSU_misc_RNA_10 | 15.2873 | 14.891 | 14.8191 | 13.9421 | 13.6764 | 14.3282 | 9.6631 | 10.0176 | 9.8908 | |||||||||
NA | BSU_misc_RNA_11 | 15.2517 | 14.9505 | 14.7974 | 13.9632 | 13.6848 | 14.2823 | 13.0368 | 13.2966 | 13.4753 | |||||||||
NA | BSU_misc_RNA_12 | 14.5489 | 14.3308 | 14.1548 | 13.3013 | 13.5291 | 13.6303 | 13.3032 | 13.1309 | 12.9028 | |||||||||
NA | BSU_misc_RNA_13 | 15.0106 | 14.6218 | 14.3986 | 14.0901 | 13.8948 | 14.3849 | 14.7259 | 14.3871 | 14.3009 | |||||||||
NA | BSU_misc_RNA_14 | 15.2888 | 15.0434 | 14.8302 | 14.4091 | 13.7783 | 14.5892 | 12.66 | 13.307 | 13.1111 | |||||||||
NA | BSU_misc_RNA_15 | 14.3628 | 13.8486 | 13.9466 | 12.8846 | 12.5559 | 13.5091 | 12.2566 | 11.606 | 11.8063 | |||||||||
NA | BSU_misc_RNA_16 | 13.9614 | 13.5004 | 13.3913 | 13.7254 | 13.2535 | 13.596 | 13.5716 | 12.1728 | 11.9541 | |||||||||
NA | BSU_misc_RNA_17 | 13.8162 | 13.3976 | 13.3734 | 12.9216 | 12.7875 | 13.3181 | 11.6949 | 11.1118 | 11.141 | |||||||||
NA | BSU_misc_RNA_18 | 14.92 | 14.5183 | 14.3422 | 13.6565 | 13.3269 | 14.1281 | 13.7377 | 13.6634 | 13.5938 | |||||||||
NA | BSU_misc_RNA_19 | 14.3709 | 13.8519 | 13.5822 | 12.7071 | 12.1205 | 12.8866 | 11.4365 | 11.0708 | 10.947 | |||||||||
scr | BSU_misc_RNA_2 | 14.7546 | 14.4139 | 14.2602 | 14.5508 | 14.4077 | 14.5895 | 15.1225 | 15.4634 | 15.3403 | |||||||||
NA | BSU_misc_RNA_20 | 16.1447 | 15.9339 | 15.8171 | 15.6107 | 15.2846 | 15.955 | 13.9069 | 12.8694 | 12.7363 | |||||||||
NA | BSU_misc_RNA_21 | 15.4159 | 15.1028 | 15.3216 | 14.9921 | 14.6419 | 15.1446 | 13.3094 | 12.6014 | 12.1455 | |||||||||
NA | BSU_misc_RNA_23 | 12.7372 | 12.2782 | 12.1402 | 11.6223 | 11.7673 | 11.9118 | 9.6346 | 9.1981 | 8.8345 | |||||||||
NA | BSU_misc_RNA_24 | 12.5587 | 12.0796 | 11.8521 | 11.7089 | 11.6092 | 11.9926 | 10.5303 | 10.2095 | 9.9624 | |||||||||
NA | BSU_misc_RNA_25 | 15.211 | 14.6956 | 14.7577 | 14.4377 | 14.4011 | 14.6691 | 13.8558 | 13.4515 | 13.5442 | |||||||||
NA | BSU_misc_RNA_26 | 14.9529 | 14.4519 | 14.4508 | 13.93 | 14.3086 | 14.5966 | 10.8278 | 10.9246 | 10.9066 | |||||||||
NA | BSU_misc_RNA_27 | 14.0612 | 13.5554 | 13.4381 | 13.2076 | 13.0382 | 13.312 | 8.9287 | 8.888 | 8.4721 | |||||||||
NA | BSU_misc_RNA_28 | 13.9018 | 13.5545 | 13.4272 | 12.9584 | 12.6407 | 13.0816 | 8.2997 | 8.3783 | 8.1768 | |||||||||
NA | BSU_misc_RNA_29 | 16.4646 | 16.4044 | 16.3874 | 16.0043 | 15.6109 | 15.9666 | 14.0652 | 13.952 | 13.8213 | |||||||||
NA | BSU_misc_RNA_3 | 16.5078 | 16.4866 | 16.4967 | 16.4256 | 16.3351 | 16.4844 | 15.5289 | 15.1889 | 15.0306 | |||||||||
NA | BSU_misc_RNA_31 | 14.4416 | 13.9435 | 13.6976 | 12.1988 | 12.3088 | 12.7785 | 10.6851 | 9.8908 | 9.5318 | |||||||||
NA | BSU_misc_RNA_32 | 13.5552 | 13.3118 | 13.0728 | 13.2191 | 12.7081 | 13.5115 | 13.6808 | 13.4509 | 13.2163 | |||||||||
NA | BSU_misc_RNA_34 | 13.9775 | 13.7908 | 13.5374 | 13.1924 | 12.9083 | 13.5208 | 9.136 | 8.8282 | 8.5691 | |||||||||
rnpB | BSU_misc_RNA_35 | 16.1957 | 16.2473 | 16.1253 | 16.0299 | 15.4992 | 15.9344 | 15.9506 | 15.7164 | 15.7566 | |||||||||
NA | BSU_misc_RNA_36 | 13.2171 | 12.6867 | 12.606 | 12.0938 | 11.8603 | 12.5373 | 11.395 | 11.2367 | 11.2817 | |||||||||
NA | BSU_misc_RNA_38 | 13.3164 | 12.99 | 12.6338 | 12.5922 | 12.5541 | 12.8141 | 13.3018 | 12.9684 | 12.8047 | |||||||||
NA | BSU_misc_RNA_39 | 16.0904 | 15.3938 | 15.41 | 15.1888 | 14.9466 | 15.2651 | 14.6647 | 14.1642 | 14.0804 | |||||||||
NA | BSU_misc_RNA_40 | 13.6136 | 13.158 | 12.9618 | 12.6104 | 12.3282 | 12.8342 | 10.093 | 9.3527 | 9.197 | |||||||||
NA | BSU_misc_RNA_41 | 16.1785 | 15.848 | 15.7149 | 15.6138 | 15.59 | 16.1153 | 16.4339 | 16.4318 | 16.444 | |||||||||
NA | BSU_misc_RNA_42 | 15.8443 | 15.4913 | 15.3963 | 15.3164 | 14.9495 | 15.5312 | 14.2885 | 13.6581 | 13.5824 | |||||||||
NA | BSU_misc_RNA_44 | 14.1065 | 13.8193 | 13.9213 | 13.4228 | 13.205 | 13.7181 | 12.0061 | 11.7011 | 11.4923 | |||||||||
NA | BSU_misc_RNA_45 | 16.1142 | 15.6092 | 15.3744 | 15.1396 | 15.3707 | 15.6598 | 13.9324 | 13.2932 | 13.564 | |||||||||
NA | BSU_misc_RNA_46 | 14.7758 | 14.3102 | 14.1294 | 14.4224 | 13.5364 | 14.332 | 13.4165 | 12.5995 | 12.3506 | |||||||||
NA | BSU_misc_RNA_47 | 16.3834 | 16.2313 | 16.1348 | 15.6007 | 15.6006 | 16.0373 | 15.1756 | 14.9243 | 14.5784 | |||||||||
NA | BSU_misc_RNA_48 | 13.6095 | 13.3003 | 13.1166 | 12.6835 | 12.5275 | 13.0406 | 11.9344 | 11.1361 | 11.0823 | |||||||||
NA | BSU_misc_RNA_49 | 14.2721 | 13.9229 | 13.8174 | 13.1347 | 13.0829 | 13.7681 | 12.5101 | 12.3262 | 12.0027 | |||||||||
NA | BSU_misc_RNA_50 | 15.4824 | 15.1849 | 14.8959 | 14.4706 | 14.3014 | 14.6774 | 13.0901 | 12.7071 | 12.5756 | |||||||||
NA | BSU_misc_RNA_51 | 13.411 | 13.0291 | 12.6315 | 12.4845 | 12.1825 | 12.7778 | 11.6098 | 11.4515 | 11.2955 | |||||||||
NA | BSU_misc_RNA_52 | 11.4049 | 11.1762 | 10.8422 | 10.4686 | 10.6128 | 10.8823 | 9.9563 | 9.7301 | 9.4862 | |||||||||
NA | BSU_misc_RNA_53 | 15.0206 | 14.5816 | 14.5356 | 13.0409 | 12.9665 | 13.4032 | 12.0186 | 11.4857 | 11.4785 | |||||||||
NA | BSU_misc_RNA_54 | 12.8997 | 12.605 | 12.5377 | 11.8055 | 11.958 | 12.5386 | 9.7419 | 9.212 | 9.0356 | |||||||||
ssrA | BSU_misc_RNA_55 | 16.4946 | 16.4599 | 16.4793 | 16.4339 | 16.4414 | 16.4719 | 16.4545 | 16.4466 | 16.4666 | |||||||||
NA | BSU_misc_RNA_56 | 12.9152 | 12.5528 | 12.2332 | 11.6331 | 11.9272 | 12.0909 | 9.8334 | 9.6321 | 9.2511 | |||||||||
NA | BSU_misc_RNA_59 | 10.4624 | 10.0359 | 9.6646 | 9.498 | 9.811 | 9.8021 | 9.0898 | 8.8284 | 8.6467 | |||||||||
NA | BSU_misc_RNA_6 | 12.8196 | 12.2568 | 12.2184 | 12.4309 | 12.233 | 12.8336 | 11.203 | 10.644 | 10.5251 | |||||||||
NA | BSU_misc_RNA_60 | 13.3565 | 12.623 | 12.705 | 12.7342 | 11.9933 | 12.6809 | 10.933 | 10.311 | 9.9495 | |||||||||
NA | BSU_misc_RNA_63 | 12.306 | 12.168 | 12.109 | 11.5134 | 11.1516 | 11.5795 | 9.6039 | 9.4872 | 9.0469 | |||||||||
NA | BSU_misc_RNA_7 | 11.8045 | 11.308 | 10.9378 | 11.1497 | 10.8455 | 11.2442 | 12.0069 | 11.2146 | 11.1089 | |||||||||
NA | BSU_misc_RNA_8 | 11.3954 | 10.9204 | 10.9481 | 11.1098 | 10.8929 | 10.7989 | 11.4205 | 10.7679 | 10.4435 | |||||||||
NA | BSU_misc_RNA_9 | 14.0349 | 13.7541 | 13.6975 | 13.1958 | 12.5974 | 13.2811 | 11.1657 | 11.0253 | 10.7395 | |||||||||
trnI-Thr | BSU_tRNA_24 | 13.5713 | 12.9988 | 13.1426 | 12.713 | 12.8082 | 12.8569 | 11.7559 | 10.99 | 10.8439 | |||||||||
trnD-Ser | BSU_tRNA_30 | 15.1841 | 14.445 | 14.7606 | 14.2794 | 13.8528 | 14.3091 | 11.9208 | 11.6807 | 11.4472 | |||||||||
trnD-Trp | BSU_tRNA_38 | 14.7593 | 14.165 | 14.109 | 13.417 | 13.4781 | 14.0785 | 11.9207 | 11.3961 | 11.3145 | |||||||||
trnD-Cys | BSU_tRNA_42 | 13.1694 | 12.7809 | 12.7013 | 12.3182 | 12.0107 | 12.6224 | 10.3098 | 9.5682 | 9.3135 | |||||||||
trnD-Leu2 | BSU_tRNA_44 | 9.6011 | 9.1053 | 9.0432 | 10.14 | 9.603 | 9.1402 | 10.8085 | 9.2619 | 10.3068 | |||||||||
trnS-Leu2 | BSU_tRNA_51 | 14.5626 | 13.6293 | 13.2363 | 13.3861 | 13.4128 | 13.1091 | 10.7849 | 10.5972 | 11.1001 | |||||||||
trnB-Met3 | BSU_tRNA_62 | 14.9042 | 14.4065 | 14.368 | 13.8693 | 13.7805 | 14.2034 | 12.656 | 12.5571 | 12.4293 | |||||||||
trnQ-Arg | BSU_tRNA_81 | 12.0911 | 11.8383 | 11.6306 | 11.6574 | 11.2774 | 11.6782 | 11.4363 | 11.1686 | 11.0229 | |||||||||
trnSL-Val2 | BSU_tRNA_83 | 10.935 | 10.5733 | 10.2951 | 10.1112 | 10.1238 | 10.6095 | 9.9723 | 9.9756 | 10.4489 | |||||||||
trnSL-Arg2 | BSU_tRNA_84 | 9.5871 | 8.5312 | 8.6942 | 9.4456 | 9.2779 | 9.2605 | 9.2271 | 9.5073 | 9.257 | |||||||||
dnaA | BSU00010 | 13.8058 | 13.4113 | 13.3547 | 13.0112 | 13.1424 | 13.2688 | 10.1624 | 10.3575 | 9.9452 | |||||||||
dnaN | BSU00020 | 13.343 | 12.8591 | 12.824 | 12.3821 | 12.6439 | 12.6358 | 9.3508 | 9.5003 | 9.0831 | |||||||||
yaaA | BSU00030 | 13.7531 | 13.2609 | 13.0873 | 12.6892 | 12.5732 | 12.8504 | 9.7791 | 9.5838 | 9.5451 | |||||||||
recF | BSU00040 | 13.9198 | 13.4994 | 13.3783 | 12.9794 | 13.0822 | 13.3262 | 11.3489 | 11.4371 | 11.2711 | |||||||||
yaaB | BSU00050 | 13.9422 | 13.464 | 13.3763 | 12.8665 | 13.0132 | 13.3194 | 11.3141 | 11.3469 | 11.1085 | |||||||||
gyrB | BSU00060 | 13.8203 | 13.4945 | 13.2317 | 12.774 | 12.8709 | 13.1453 | 10.7612 | 10.5434 | 10.3109 | |||||||||
gyrA | BSU00070 | 14.0605 | 13.7463 | 13.531 | 13.1875 | 13.152 | 13.4256 | 11.2923 | 10.8493 | 10.6189 | |||||||||
yaaC | BSU00080 | 7.3134 | 7.3793 | 7.0895 | 7.4773 | 7.4714 | 7.3761 | 8.1406 | 8.2011 | 7.9557 | |||||||||
guaB | BSU00090 | 15.1549 | 14.7791 | 14.7015 | 14.3017 | 14.3954 | 14.398 | 11.2786 | 11.0195 | 10.7257 | |||||||||
dacA | BSU00100 | 14.2466 | 13.9166 | 13.8801 | 13.4492 | 13.8855 | 13.4824 | 9.8938 | 9.6821 | 9.3957 | |||||||||
pdxS | BSU00110 | 15.4216 | 14.9338 | 14.9962 | 14.542 | 14.7967 | 14.8995 | 11.1762 | 11.3939 | 11.1876 | |||||||||
pdxT | BSU00120 | 15.4268 | 14.9949 | 14.8596 | 14.6811 | 14.8141 | 14.7572 | 11.279 | 11.3004 | 11.2107 | |||||||||
serS | BSU00130 | 13.0283 | 12.6468 | 12.3656 | 12.1456 | 12.1441 | 12.3142 | 9.1703 | 8.6889 | 8.42 | |||||||||
dck | BSU00140 | 11.5877 | 11.3248 | 11.0598 | 10.7807 | 10.8179 | 10.9856 | 8.975 | 8.6717 | 8.3095 | |||||||||
dgk | BSU00150 | 12.3196 | 12.1839 | 11.847 | 11.5267 | 11.4892 | 11.7596 | 9.442 | 9.1296 | 8.8532 | |||||||||
yaaH | BSU00160 | 8.3028 | 7.9867 | 7.2124 | 7.4033 | 7.5443 | 7.6366 | 12.1258 | 10.3734 | 10.0764 | |||||||||
yaaI | BSU00170 | 9.4316 | 9.191 | 7.5243 | 7.7559 | 7.7902 | 8.4955 | 8.4222 | 9.7958 | 9.4252 | |||||||||
tadA | BSU00180 | 11.165 | 10.7148 | 10.4693 | 10.5277 | 10.5321 | 10.529 | 8.8539 | 8.8365 | 8.7245 | |||||||||
dnaX | BSU00190 | 12.8064 | 12.3788 | 12.1543 | 11.795 | 11.838 | 12.03 | 10.7393 | 10.0054 | 9.8302 | |||||||||
yaaK | BSU00200 | 14.6564 | 14.2584 | 14.1096 | 13.8973 | 14.0017 | 13.9884 | 12.4734 | 12.3339 | 12.1521 | |||||||||
recR | BSU00210 | 13.0681 | 12.6262 | 12.455 | 12.1047 | 12.3369 | 12.3377 | 10.7863 | 9.9701 | 9.6354 | |||||||||
yaaL | BSU00220 | 12.4196 | 11.6187 | 11.509 | 11.4261 | 11.8214 | 11.5086 | 10.1718 | 9.3609 | 8.9169 | |||||||||
bofA | BSU00230 | 11.0793 | 10.5241 | 10.5523 | 10.2227 | 10.5894 | 10.6551 | 11.8867 | 10.3756 | 10.1377 | |||||||||
csfB | BSU00240 | 11.4636 | 11.1288 | 10.7353 | 10.0279 | 10.285 | 10.445 | 12.2032 | 10.4761 | 10.1312 | |||||||||
xpaC | BSU00250 | 12.8718 | 12.4433 | 12.0713 | 12.5072 | 12.8638 | 12.6184 | 10.9713 | 10.8812 | 10.8313 | |||||||||
yaaN | BSU00260 | 12.3259 | 11.9295 | 11.7084 | 11.9849 | 12.5349 | 12.1141 | 10.4518 | 10.326 | 9.9571 | |||||||||
yaaO | BSU00270 | 11.7859 | 11.3924 | 11.1937 | 11.2021 | 11.136 | 11.3788 | 9.2722 | 9.5285 | 9.3317 | |||||||||
tmk | BSU00280 | 11.7879 | 11.4276 | 11.2607 | 11.1772 | 11.0747 | 11.3547 | 9.0749 | 9.6713 | 9.2814 | |||||||||
yaaQ | BSU00290 | 13.3087 | 12.9815 | 12.6843 | 12.7253 | 12.9261 | 12.8082 | 11.4676 | 12.1616 | 11.7148 | |||||||||
yaaR | BSU00300 | 14.1033 | 13.6002 | 13.4063 | 13.1972 | 13.2936 | 13.473 | 12.2251 | 12.6957 | 12.5608 | |||||||||
holB | BSU00310 | 13.5964 | 13.1263 | 12.9034 | 12.9167 | 12.9642 | 12.9807 | 11.2157 | 11.7292 | 11.399 | |||||||||
yaaT | BSU00320 | 13.6741 | 13.295 | 13.0195 | 13.0498 | 13.1352 | 13.4465 | 11.3668 | 11.5456 | 11.2289 | |||||||||
yabA | BSU00330 | 13.3757 | 13.1254 | 12.6289 | 12.6707 | 13.1178 | 12.8766 | 11.1184 | 11.4674 | 11.2698 | |||||||||
yabB | BSU00340 | 11.7456 | 11.307 | 11.18 | 10.9918 | 11.0616 | 11.3828 | 8.8609 | 8.8621 | 8.6599 | |||||||||
yazA | BSU00350 | 12.1991 | 11.9153 | 11.7378 | 11.4594 | 11.4383 | 11.6948 | 9.2397 | 9.1871 | 8.9647 | |||||||||
yabC | BSU00360 | 11.8931 | 11.4412 | 11.339 | 11.0703 | 11.0701 | 11.4211 | 8.9501 | 8.8971 | 8.5854 | |||||||||
abrB | BSU00370 | 14.0656 | 13.7589 | 13.2476 | 13.0623 | 12.7721 | 13.2224 | 9.559 | 11.3872 | 10.9869 | |||||||||
metS | BSU00380 | 13.5749 | 13.2054 | 13.0347 | 12.7654 | 12.8149 | 13.0266 | 10.7965 | 10.2252 | 10.0792 | |||||||||
yabD | BSU00390 | 11.6969 | 11.3841 | 11.058 | 10.8257 | 10.8729 | 11.0224 | 9.5511 | 9.2687 | 9.0481 | |||||||||
yabE | BSU00400 | 14.2847 | 13.8232 | 13.6737 | 13.4841 | 13.602 | 13.6825 | 14.3292 | 13.2894 | 13.3266 | |||||||||
rnmV | BSU00410 | 11.9077 | 11.4801 | 11.2574 | 10.7961 | 10.7095 | 11.2141 | 9.5247 | 8.9249 | 8.7637 | |||||||||
ksgA | BSU00420 | 11.1754 | 10.786 | 10.6139 | 10.0488 | 10.1639 | 10.3642 | 8.9535 | 8.4737 | 8.276 | |||||||||
yabG | BSU00430 | 9.3139 | 9.1108 | 7.2316 | 7.3357 | 7.4361 | 7.327 | 8.0099 | 7.9548 | 7.6468 | |||||||||
veg | BSU00440 | 14.8985 | 14.3556 | 14.4865 | 14.1498 | 14.3577 | 14.5357 | 13.755 | 14.3451 | 14.4306 | |||||||||
sspF | BSU00450 | 9.2214 | 8.9818 | 8.4945 | 8.6546 | 8.8307 | 8.7682 | 8.8505 | 9.1099 | 8.939 | |||||||||
ispE | BSU00460 | 12.894 | 12.4914 | 12.3067 | 11.9521 | 11.9378 | 12.2571 | 9.5597 | 9.3057 | 9.0286 | |||||||||
purR | BSU00470 | 13.5128 | 13.2166 | 13.0831 | 12.5306 | 12.3713 | 13.0835 | 9.5177 | 9.3103 | 9.0214 | |||||||||
yabJ | BSU00480 | 14.4761 | 14.2881 | 13.8576 | 13.519 | 13.8038 | 14.0742 | 11.1452 | 11.1693 | 10.9938 | |||||||||
spoVG | BSU00490 | 15.7874 | 15.464 | 14.8815 | 15.8477 | 15.9071 | 15.9412 | 16.2049 | 15.8465 | 15.6363 | |||||||||
gcaD | BSU00500 | 14.7189 | 14.2919 | 14.1956 | 13.5265 | 13.6863 | 13.8557 | 12.1055 | 11.2091 | 11.3101 | |||||||||
prs | BSU00510 | 14.2879 | 13.9797 | 13.905 | 13.315 | 13.3922 | 13.5807 | 11.6081 | 10.7355 | 10.6548 | |||||||||
ctc | BSU00520 | 15.0321 | 14.6552 | 13.5547 | 13.247 | 13.1697 | 14.045 | 13.8638 | 15.7084 | 15.5634 | |||||||||
pth | BSU00530 | 12.5449 | 12.1911 | 11.6831 | 11.5451 | 11.4965 | 11.8525 | 11.4608 | 11.2593 | 11.5169 | |||||||||
yabK | BSU00540 | 12.6264 | 12.2324 | 11.8776 | 11.6461 | 11.5282 | 11.9452 | 11.7737 | 11.1701 | 11.1423 | |||||||||
mfd | BSU00550 | 12.3577 | 11.8628 | 11.6624 | 11.3925 | 11.3025 | 11.6011 | 10.2176 | 9.5986 | 9.6608 | |||||||||
spoVT | BSU00560 | 11.7526 | 11.3114 | 11.1488 | 10.9916 | 10.8375 | 11.2195 | 9.798 | 8.9602 | 8.7245 | |||||||||
yabM | BSU00570 | 10.5524 | 10.0984 | 9.8402 | 9.4142 | 9.343 | 9.6879 | 8.0292 | 8.2673 | 7.8586 | |||||||||
yabN | BSU00580 | 13.0998 | 12.729 | 12.5974 | 12.0612 | 12.1369 | 12.4578 | 9.1434 | 9.1531 | 8.8854 | |||||||||
yabO | BSU00590 | 13.1388 | 12.7942 | 12.5341 | 12.1029 | 12.3001 | 12.3831 | 9.486 | 9.5459 | 9.2369 | |||||||||
yabP | BSU00600 | 12.8321 | 12.3501 | 12.1501 | 11.7714 | 11.8482 | 12.0757 | 12.7257 | 11.0517 | 10.8858 | |||||||||
yabQ | BSU00610 | 12.6671 | 12.416 | 12.2162 | 11.5462 | 11.4764 | 12.0422 | 12.2904 | 11.2642 | 11.1087 | |||||||||
divIC | BSU00620 | 14.1782 | 13.6898 | 13.5648 | 13.3856 | 13.2553 | 13.5301 | 14.1052 | 13.4556 | 13.1239 | |||||||||
yabR | BSU00630 | 14.726 | 14.3664 | 14.2232 | 13.9176 | 14.2263 | 14.2498 | 13.3488 | 13.1116 | 12.891 | |||||||||
spoIIE | BSU00640 | 8.6658 | 8.4008 | 8.0106 | 8.1044 | 8.1074 | 8.7787 | 13.7294 | 12.6574 | 12.5724 | |||||||||
yabS | BSU00650 | 9.77 | 9.4896 | 9.0853 | 9.1004 | 9.158 | 9.6321 | 13.5317 | 11.976 | 12.3921 | |||||||||
yabT | BSU00660 | 9 | 8.8076 | 8.3055 | 8.4109 | 8.2966 | 8.7083 | 11.4665 | 10.2439 | 10.0568 | |||||||||
tilS | BSU00670 | 12.8922 | 12.5044 | 12.1436 | 12.1895 | 12.426 | 12.342 | 11.5711 | 10.8537 | 10.539 | |||||||||
hprT | BSU00680 | 14.3603 | 14.02 | 13.8132 | 13.6639 | 13.6153 | 13.8351 | 12.1883 | 11.3913 | 11.1166 | |||||||||
ftsH | BSU00690 | 15.4416 | 15.0061 | 14.8829 | 14.6915 | 14.7055 | 14.9432 | 12.6557 | 11.901 | 11.7714 | |||||||||
coaX | BSU00700 | 12.167 | 11.7573 | 11.5922 | 11.2398 | 11.2752 | 11.481 | 9.0335 | 9.0956 | 8.7924 | |||||||||
hslO | BSU00710 | 12.0197 | 11.6291 | 11.3897 | 11.193 | 11.2259 | 11.1794 | 8.905 | 8.824 | 8.4383 | |||||||||
yacD | BSU00720 | 12.0365 | 11.6261 | 11.3559 | 11.3874 | 11.4999 | 11.5669 | 9.75 | 9.8117 | 9.4571 | |||||||||
cysK | BSU00730 | 14.7748 | 14.4877 | 14.1646 | 13.5817 | 13.7263 | 13.9175 | 11.0512 | 11.1 | 10.6779 | |||||||||
pabB | BSU00740 | 12.1139 | 11.7494 | 11.7052 | 11.3777 | 11.3195 | 11.581 | 10.3641 | 10.4361 | 10.2974 | |||||||||
pabA | BSU00750 | 13.2213 | 12.9102 | 12.6723 | 12.3648 | 12.5197 | 12.6333 | 11.5112 | 11.8696 | 11.725 | |||||||||
pabC | BSU00760 | 12.9721 | 12.5433 | 12.3443 | 12.0405 | 12.1322 | 12.1409 | 10.6014 | 10.6817 | 10.4248 | |||||||||
sul | BSU00770 | 12.6998 | 12.3928 | 12.1652 | 11.8339 | 11.8248 | 12.033 | 10.1392 | 10.0523 | 9.8837 | |||||||||
folB | BSU00780 | 13.0801 | 12.574 | 12.3931 | 12.0774 | 12.2313 | 12.2611 | 10.4779 | 10.4102 | 10.2998 | |||||||||
folK | BSU00790 | 12.9416 | 12.7286 | 12.3776 | 12.2138 | 12.1922 | 12.2134 | 10.3954 | 10.1324 | 9.9873 | |||||||||
yazB | BSU00800 | 13.6217 | 13.2184 | 13.1417 | 12.5718 | 12.6995 | 12.8641 | 10.422 | 10.1434 | 10.0042 | |||||||||
dusB | BSU00810 | 14.0354 | 13.6413 | 13.5667 | 13.1198 | 13.2649 | 13.285 | 10.6022 | 10.3137 | 10.1272 | |||||||||
lysS | BSU00820 | 14.1374 | 13.8042 | 13.69 | 13.1175 | 13.2779 | 13.4504 | 10.3565 | 9.9305 | 9.683 | |||||||||
ctsR | BSU00830 | 13.6156 | 13.2855 | 12.8666 | 13.0263 | 12.9975 | 13.1881 | 12.4375 | 13.8271 | 13.6698 | |||||||||
mcsA | BSU00840 | 12.9976 | 12.6535 | 12.2889 | 12.4272 | 12.447 | 12.579 | 11.7282 | 13.0508 | 12.8637 | |||||||||
mcsB | BSU00850 | 13.1229 | 12.7069 | 12.2811 | 12.5756 | 12.4375 | 12.4922 | 11.6622 | 12.8809 | 12.7195 | |||||||||
clpC | BSU00860 | 13.3265 | 12.8859 | 12.4049 | 12.8418 | 12.8618 | 12.8481 | 12.1406 | 12.7459 | 12.613 | |||||||||
radA | BSU00870 | 12.4502 | 12.0054 | 11.7467 | 11.4961 | 11.4532 | 11.5812 | 11.4924 | 11.9423 | 11.8285 | |||||||||
disA | BSU00880 | 12.7754 | 12.4055 | 12.1384 | 11.9535 | 12.1221 | 12.0442 | 11.6128 | 12.1699 | 11.7706 | |||||||||
yacL | BSU00890 | 13.5068 | 13.0649 | 12.7374 | 12.6223 | 12.7291 | 12.7101 | 12.6972 | 13.4886 | 13.2376 | |||||||||
ispD | BSU00900 | 13.221 | 12.7325 | 12.4356 | 11.9599 | 12.4005 | 12.3479 | 11.6619 | 12.3442 | 12.1291 | |||||||||
ispF | BSU00910 | 12.4275 | 11.9249 | 11.563 | 11.1277 | 11.2491 | 11.408 | 9.3187 | 8.8992 | 8.733 | |||||||||
gltX | BSU00920 | 14.1432 | 13.6843 | 13.555 | 13.1917 | 13.3662 | 13.4565 | 10.9361 | 10.6818 | 10.5858 | |||||||||
cysE | BSU00930 | 12.1057 | 11.666 | 11.4105 | 11.2537 | 11.1303 | 11.4137 | 9.0314 | 8.7271 | 8.5816 | |||||||||
cysS | BSU00940 | 12.4657 | 12.0313 | 11.8487 | 11.5068 | 11.5891 | 11.768 | 9.2769 | 8.9016 | 8.6731 | |||||||||
mrnC | BSU00950 | 12.7896 | 12.4609 | 12.3291 | 11.8756 | 12.0543 | 12.1144 | 9.5429 | 9.1314 | 8.9472 | |||||||||
rlmB | BSU00960 | 12.7508 | 12.3248 | 12.1257 | 11.8246 | 11.9011 | 12.1257 | 9.3962 | 9.0473 | 8.8657 | |||||||||
yacP | BSU00970 | 12.9502 | 12.6479 | 12.5137 | 12.1656 | 12.3253 | 12.4066 | 9.5268 | 9.1621 | 8.8906 | |||||||||
sigH | BSU00980 | 14.9682 | 14.5397 | 14.3629 | 14.814 | 14.9085 | 14.9107 | 14.2447 | 14.2932 | 13.9929 | |||||||||
rpmGB | BSU00990 | 14.1361 | 13.8615 | 13.541 | 13.9344 | 14.2946 | 14.144 | 13.4326 | 13.4234 | 13.1078 | |||||||||
secE | BSU01000 | 13.4778 | 12.9831 | 12.7478 | 13.0788 | 13.0795 | 13.2789 | 12.185 | 12.1854 | 11.8474 | |||||||||
nusG | BSU01010 | 14.2549 | 13.9847 | 13.6098 | 13.4394 | 13.5742 | 13.468 | 11.1931 | 10.3668 | 10.0618 | |||||||||
rplK | BSU01020 | 16.5062 | 16.4834 | 16.4951 | 16.4571 | 16.4156 | 16.4751 | 15.2232 | 14.9069 | 14.781 | |||||||||
rplA | BSU01030 | 16.5017 | 16.4588 | 16.4025 | 16.0192 | 15.9969 | 16.1167 | 14.1904 | 14.0332 | 13.8668 | |||||||||
rplJ | BSU01040 | 16.5067 | 16.482 | 16.4952 | 16.3229 | 16.4125 | 16.4688 | 12.7363 | 11.9852 | 11.6836 | |||||||||
rplL | BSU01050 | 16.4861 | 16.4791 | 16.4824 | 16.3323 | 16.4124 | 16.4081 | 12.8576 | 11.9071 | 11.9179 | |||||||||
ybxB | BSU01060 | 13.8863 | 13.3673 | 13.1989 | 12.6473 | 12.8746 | 12.8962 | 9.8946 | 9.3819 | 8.9339 | |||||||||
rpoB | BSU01070 | 15.4946 | 15.0102 | 14.9802 | 14.5637 | 14.5573 | 14.8245 | 13.0165 | 12.3128 | 12.0828 | |||||||||
rpoC | BSU01080 | 15.6646 | 15.4633 | 15.2452 | 14.8726 | 14.998 | 15.048 | 13.287 | 12.5882 | 12.4646 | |||||||||
rplGB | BSU01090 | 16.4933 | 16.4494 | 16.48 | 16.1076 | 16.1055 | 16.3049 | 14.6821 | 14.1295 | 14.0931 | |||||||||
rpsL | BSU01100 | 16.4717 | 16.4456 | 16.4692 | 15.9011 | 16.0305 | 16.0478 | 14.5227 | 14.0917 | 13.9884 | |||||||||
rpsG | BSU01110 | 16.507 | 16.4856 | 16.496 | 16.4744 | 16.4764 | 16.485 | 15.2219 | 14.7244 | 14.6966 | |||||||||
fusA | BSU01120 | 16.4971 | 16.4607 | 16.482 | 16.373 | 16.3375 | 16.4356 | 14.7432 | 14.1582 | 14.0043 | |||||||||
tufA | BSU01130 | 16.4494 | 16.3939 | 16.3666 | 15.8241 | 15.9048 | 16.3262 | 14.76 | 14.218 | 14.0236 | |||||||||
ybaC | BSU01140 | 10.4256 | 10.1683 | 9.9718 | 9.6752 | 9.7491 | 9.7968 | 9.0078 | 8.6856 | 8.4141 | |||||||||
rpsJ | BSU01150 | 16.4959 | 16.4733 | 16.4852 | 16.1455 | 15.8308 | 16.4331 | 13.8839 | 13.3614 | 13.1762 | |||||||||
rplC | BSU01160 | 16.4581 | 16.4255 | 16.4618 | 15.6915 | 15.6071 | 15.8505 | 13.2219 | 12.5109 | 12.4865 | |||||||||
rplD | BSU01170 | 16.4934 | 16.4766 | 16.4905 | 16.2386 | 16.389 | 16.4472 | 13.7405 | 13.0998 | 12.8713 | |||||||||
rplW | BSU01180 | 16.4916 | 16.47 | 16.4836 | 16.3571 | 16.3379 | 16.4657 | 14.1288 | 13.4731 | 13.3363 | |||||||||
rplB | BSU01190 | 16.506 | 16.4836 | 16.495 | 16.3976 | 16.4098 | 16.4736 | 13.9545 | 13.3127 | 13.1259 | |||||||||
rpsS | BSU01200 | 16.4913 | 16.4699 | 16.4809 | 16.2121 | 16.3116 | 16.3436 | 13.8924 | 13.1926 | 13.1297 | |||||||||
rplV | BSU01210 | 16.4667 | 16.4396 | 16.4312 | 15.9548 | 15.9008 | 15.9272 | 13.2283 | 12.7388 | 12.5967 | |||||||||
rpsC | BSU01220 | 16.4793 | 16.4369 | 16.4271 | 15.8949 | 15.8187 | 16.0536 | 13.1078 | 12.4255 | 12.2361 | |||||||||
rplP | BSU01230 | 16.3073 | 16.0783 | 16.4137 | 15.6086 | 15.6913 | 16.0402 | 13.1562 | 12.4454 | 12.2946 | |||||||||
rpmC | BSU01240 | 16.4554 | 16.2816 | 16.4635 | 15.9336 | 15.7367 | 16.1855 | 13.2363 | 12.4946 | 12.3435 | |||||||||
rpsQ | BSU01250 | 16.4738 | 16.4226 | 16.4628 | 15.9533 | 15.9098 | 16.1111 | 13.4737 | 12.6188 | 12.4468 | |||||||||
rplNA | BSU01260 | 16.4642 | 16.3887 | 16.4419 | 15.9321 | 15.841 | 16.0944 | 13.2326 | 12.464 | 12.3898 | |||||||||
rplX | BSU01270 | 16.4403 | 16.3522 | 16.4191 | 15.7392 | 15.7065 | 15.9391 | 13.1913 | 12.4566 | 12.3686 | |||||||||
rplE | BSU01280 | 16.4486 | 16.0699 | 16.2997 | 15.5005 | 15.5085 | 15.8262 | 12.5381 | 11.9642 | 11.6808 | |||||||||
rpsNA | BSU01290 | 16.4745 | 16.225 | 16.4478 | 15.6527 | 15.906 | 15.8631 | 13.0542 | 12.3056 | 12.3256 | |||||||||
rpsH | BSU01300 | 16.4768 | 16.3875 | 16.4661 | 15.9409 | 15.9761 | 16.142 | 13.2594 | 12.487 | 12.4299 | |||||||||
rplF | BSU01310 | 16.4424 | 16.2056 | 16.4089 | 15.7203 | 15.605 | 15.6552 | 12.7555 | 12.028 | 11.9698 | |||||||||
rplR | BSU01320 | 16.4378 | 16.2813 | 16.2195 | 15.6025 | 15.5385 | 15.856 | 12.7688 | 12.0872 | 12.0086 | |||||||||
rpsE | BSU01330 | 16.4806 | 16.3944 | 16.3758 | 15.8613 | 15.6647 | 16.0715 | 12.9549 | 12.1654 | 12.0924 | |||||||||
rpmD | BSU01340 | 16.4931 | 16.4643 | 16.4681 | 16.0843 | 15.799 | 16.079 | 13.0284 | 12.5284 | 12.2693 | |||||||||
rplO | BSU01350 | 16.4394 | 16.2433 | 16.0321 | 15.5799 | 15.376 | 15.7169 | 12.7804 | 12.151 | 12.1577 | |||||||||
secY | BSU01360 | 16.3884 | 15.9143 | 15.9516 | 15.3359 | 15.188 | 15.468 | 12.4679 | 11.8883 | 11.7382 | |||||||||
adk | BSU01370 | 16.437 | 16.2875 | 16.2754 | 15.692 | 15.503 | 15.88 | 12.92 | 12.2615 | 12.1778 |