Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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ORF | Name | Array 1 | Array 2 | Array 3 | Array 4 | Average | Standard deviation | ||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 1.137 | 1.0828370330265296 | 2.4875 | 1.662510390689942 | 1.592461855929118 | 0.6514504429575791 | ||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 1.5430000000000001 | 1.4598540145985401 | 1.5985 | 1.547987616099071 | 1.5373354076744028 | 0.05741669553324797 | ||
CA_P0004 | Cysteine protease | 0.022 | 0.0196645232336342 | 0.0415 | 0.036404011722091775 | 0.029892133738931494 | 0.010708826664698436 | ||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 1.7045 | 1.4357501794687724 | 0.6385000000000001 | 0.39401103230890466 | 1.0431903029444192 | 0.6262698403501651 | ||
CA_P0006 | GntR family HTH transcriptional regulator | 0.9925 | 0.9925558312655086 | 0.9864999999999999 | 1.1389521640091116 | 1.027626998818655 | 0.0742711592209243 | ||
CA_P0007 | hypothetical protein | 1.155 | 1.106194690265487 | 1.58 | 1.0834236186348862 | 1.2311545772250934 | 0.23447249881260057 | ||
CA_P0009 | Response regulator (CheY + HTH domains) | 0.2465 | 0.2800336040324839 | 0.5075 | 0.23975065931431316 | 0.3184460658366993 | 0.1272610317963096 | ||
CA_P0010 | bgla Beta_glucosidase | 0.2975 | 0.32010243277848915 | 0.34650000000000003 | 0.3337226764558652 | 0.3244562773085886 | 0.020955418645163666 | ||
CA_P0012 | pedb Pediocin immunity protein, PedB | 0.763 | 0.6472491909385114 | 0.8755 | 0.3861749372465727 | 0.667981032046271 | 0.20971187427320875 | ||
CA_P0013 | FAD dependent dehydrogenase | 1.5255 | 1.17096018735363 | 1.764 | 0.7215007215007215 | 1.2954902272135878 | 0.4536436142574396 | ||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1.2175 | 1.0065425264217414 | 1.9925 | 0.9438414346389807 | 1.2900959902651805 | 0.4826787595781291 | ||
CA_P0015 | GLPQ related phosphodiesterase | 0.971 | 0.9103322712790168 | 0.7044999999999999 | 0.3896356906292616 | 0.7438669904770696 | 0.26225284711419483 | ||
CA_P0018 | hypothetical protein | 0.739 | 0.8779631255487269 | 0.508 | 0.7083210418495757 | 0.1868798475527586 | |||
CA_P0019 | grkc Spore germination protein, GRKC | 0.7225 | 0.9025270758122743 | 0.5569999999999999 | 0.5060728744939271 | 0.6720249875765504 | 0.1793040166530483 | ||
CA_P0020 | grka Spore germination protein, GRKA | 0.6765 | 0.7037297677691766 | 0.531 | 0.48250904704463216 | 0.5984347037034522 | 0.10827039936785426 | ||
CA_P0025 | pdc Pyruvate decarboxylase | 1.137 | 1.1173184357541899 | 2.144 | 1.358695652173913 | 1.4392535219820257 | 0.48240942499147804 | ||
CA_P0026 | hypothetical protein | 1.0845 | 1.1554015020219528 | 1.6505 | 1.3245033112582782 | 1.3037262033200578 | 0.25215345824543517 | ||
CA_P0027 | Predicted amino acid permeases | 0.877 | 0.7840062720501764 | 0.353 | 0.556947925368978 | 0.6427385493547886 | 0.2353320029802095 | ||
CA_P0028 | HTH transcriptional regulator TetR family | 1.2015 | 0.921234454168586 | 1.819 | 1.1061946902654867 | 1.2619822861085181 | 0.3891468019964196 | ||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 1.1125 | 0.9960159362549801 | 1.0485 | 0.8616975441619993 | 1.0046783701042448 | 0.1065588936807836 | ||
CA_P0032 | Rhodanese-like domain | 0.9239999999999999 | 0.8417508417508418 | 1.278 | 0.8361204013377926 | 0.9699678107721585 | 0.20924593933533983 | ||
CA_P0033 | hypothetical protein | 0.8845000000000001 | 0.8186655751125665 | 1.119 | 0.721240533717995 | 0.8858515272076404 | 0.16928355731116965 | ||
CA_P0034 | Rhodanese-like domain | 0.835 | 0.7140307033202428 | 0.8405 | 0.6273525721455459 | 0.7542208188664471 | 0.10276213734532307 | ||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2.8995 | 3.3783783783783785 | 2.9415 | 2.306805074971165 | 2.8815458633373856 | 0.44010846062459397 | ||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 90.372 | 19.047619047619047 | 269.9845 | 200 | 144.85102976190478 | 111.7948375720697 | ||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 114.935 | 54.054054054054056 | 451.8835 | 250 | 217.7181385135135 | 176.28182096269487 | ||
CA_P0038 | Uncharacterized conserved protein, YCII family | 4.164 | 3.361344537815126 | 3.1865 | 2.5380710659898478 | 3.312478900951244 | 0.6690924726637282 | ||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 0.2145 | 0.1866019779809666 | 0.25549310168625444 | 0.21886502655574036 | 0.034652371116109144 | |||
CA_P0044 | hypothetical protein | 0.1835 | 0.16975046681378375 | 0.2865 | 0.18589088205223533 | 0.20641033721650476 | 0.05386474349185711 | ||
CA_P0045 | Glycosyl transferase | 0.1895 | 0.1760098565519669 | 0.226 | 0.14084507042253522 | 0.18308873174362553 | 0.03519999384382431 | ||
CA_P0046 | TetR family HTH transcriptional regulator | 0.467 | 0.4428697962798937 | 0.364 | 0.6353240152477764 | 0.4772984528819175 | 0.11416363740068204 | ||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 0.87 | 0.9170105456212746 | 0.7625 | 0.6966213862765587 | 0.8115329829744583 | 0.10025437110472638 | ||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1.509 | 1.6949152542372883 | 1.675 | 1.3793103448275863 | 1.5645563997662186 | 0.14898974707108825 | ||
CA_P0049 | Permease, MDR related | 0.816 | 0.9128251939753538 | 0.4305 | 0.3269042170644001 | 0.6215573527599384 | 0.2863379593015107 | ||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 0.98 | 1.1217049915872126 | 1.3225 | 1.2399256044637321 | 1.1660326490127362 | 0.14890185638174003 | ||
CA_P0052 | MarR family HTH transcriptional regulator | 1.439 | 1.4275517487508922 | 0.4505 | 0.49443757725587145 | 0.9528723315016909 | 0.5550318437106448 | ||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 0.059 | 0.06588917440864465 | 0.051000000000000004 | 0.04826021910139472 | 0.056037348377509844 | 0.00799363078202049 | ||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 0.0595 | 0.05707436790137549 | 0.061 | 0.036093264996751605 | 0.053416908224531774 | 0.011661802496399558 | ||
CA_P0055 | hypothetical protein | 1.02 | 0.9259259259259258 | 0.503 | 0.37814331631688414 | 0.7067673105607024 | 0.31393208547289375 | ||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 0.101 | 0.09124920156948627 | 0.159 | 0.11145165784341042 | 0.11567521485322417 | 0.03003812853555221 | ||
CA_P0057 | Putative glycoportein or S-layer protein | 0.6134999999999999 | 0.5497526113249038 | 1.396 | 0.8726003490401397 | 0.8579632400912608 | 0.3849042597027415 | ||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1.2525 | 1.187648456057007 | 1.455 | 1.4936519790888723 | 1.3472001087864698 | 0.1499931191239491 | ||
CA_P0059 | Alcohol dehydrogenase | 1.0234999999999999 | 0.8583690987124464 | 0.9135 | 1.0060362173038229 | 0.9503513290040673 | 0.07803906285148514 | ||
CA_P0062 | Hypothetical protein, CF-18 family | 1.08 | 0.9657170449058428 | 1.2865000000000002 | 1.4492753623188408 | 1.195373101806171 | 0.2151149510992163 | ||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 0.755 | 0.54421768707483 | 0.7993605115907275 | 0.6995260662218525 | 0.13631758221925774 | |||
CA_P0065 | Predicted secreted metalloprotease | 0.0665 | 0.06532745386248572 | 0.067 | 0.05780848050408996 | 0.06415898359164393 | 0.004291306883130686 | ||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 1.6455 | 1.773049645390071 | 1.8195000000000001 | 1.6920473773265652 | 1.732524255679159 | 0.07835535733454028 | ||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 1.48 | 1.7889087656529519 | 1.4769999999999999 | 2.066115702479339 | 1.7030061170330728 | 0.2828652973020924 | ||
CA_P0072 | hypothetical protein | 1.9565000000000001 | 2.109704641350211 | 6.0375 | 2.0242914979757085 | 3.03199903483148 | 2.004647571156857 | ||
CA_P0073 | ABC ATPase containing transporter | 2.657 | 2.398081534772182 | 7.5625 | 2.1052631578947367 | 3.6807111731667295 | 2.597655628979498 | ||
CA_P0074 | hypothetical protein | 2.937 | 2.2050716648291067 | 8.293500000000002 | 2.0120724346076457 | 3.8619110248591886 | 2.9811329347204207 | ||
CA_P0076 | penicillin binding protein 1A | 1.4595 | 1.3783597518952446 | 2.3195 | 1.402524544179523 | 1.639971074018692 | 0.454294584382796 | ||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1.09 | 0.9900990099009901 | 2.6255 | 1.3280212483399734 | 1.5084050645602407 | 0.7580992415872404 | ||
CA_P0080 | Site-Specific Recombinase, Xerd | 0.8565 | 0.9237875288683602 | 0.9375 | 0.8554319931565441 | 0.893304880506226 | 0.043479325598566904 | ||
CA_P0081 | TnpR resolvase C-terminal fragment | 1.097 | 0.9803921568627451 | 0.8818342151675486 | 0.9864087906767646 | 0.10770899986760639 | |||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 0.9535 | 0.856898029134533 | 0.6065 | 0.39992001599680066 | 0.7042045112828333 | 0.25006584245297725 | ||
CA_P0083 | SAM-dependent methyltransferase | 2.0105 | 1.8034265103697025 | 3.0140000000000002 | 2.157497303128371 | 2.2463559533745183 | 0.5319736097044261 | ||
CA_P0084 | hypothetical protein | 1.229 | 1.2172854534388313 | 1.3385 | 0.9794319294809012 | 1.1910543457299332 | 0.15127481803197904 | ||
CA_P0085 | Hypothetical secreted protein (fragment) | 1.1804999999999999 | 1.0834236186348862 | 1.1355 | 0.8572653236176596 | 1.0641722355631364 | 0.14352802829578543 | ||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 0.9225 | 0.9930486593843098 | 1.332 | 1.124859392575928 | 1.0931020129900595 | 0.1799967590074701 | ||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1.54 | 1.2944983818770228 | 0.897 | 0.6918021445866482 | 1.1058251316159178 | 0.3825913316161554 | ||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 0.9844999999999999 | 1.0775862068965518 | 0.667 | 0.5885815185403179 | 0.8294169313592175 | 0.23806140885603527 | ||
CA_P0089 | Predicted membrane protein | 1.0375 | 1.0389610389610389 | 0.4125 | 0.42589437819420783 | 0.7287138542888117 | 0.35744138732879893 | ||
CA_P0090 | ABC-type transporter, ATPase component | 1.1405 | 1.1820330969267139 | 0.46399999999999997 | 0.5374899220639613 | 0.8310057547476688 | 0.38290627698150487 | ||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 0.7835000000000001 | 0.6281407035175879 | 0.8320000000000001 | 0.3787161522438932 | 0.6555892139403704 | 0.20403761715770213 | ||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 0.8705 | 1.1092623405435387 | 1.1055000000000001 | 1.1494252873563218 | 1.0586719069749653 | 0.12701326031856566 | ||
CA_P0094 | TnpA, transposase (5' segment) | 1.0154999999999998 | 0.924214417744917 | 1.7719999999999998 | 1.4064697609001406 | 1.2795460446612643 | 0.38927342860810543 | ||
CA_P0096 | ipyr Inorganic pyrophosphatase | 0.782 | 0.8240626287597858 | 1.361 | 0.8695652173913044 | 0.9591569615377726 | 0.2702712069692132 | ||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 0.8345 | 0.7821666014861164 | 1.664 | 0.8517887563884157 | 1.033113839468633 | 0.4216310024905598 | ||
CA_P0098 | amyA alpha-amylase | 0.885 | 1.0822510822510822 | 1.385 | 1 | 1.0880627705627706 | 0.21384966237578326 | ||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 0.9844999999999999 | 0.84530853761623 | 0.467 | 0.4065040650406504 | 0.6758281506642201 | 0.2829290675184528 | ||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 0.7195 | 0.6583278472679394 | 0.4235 | 0.4921259842519685 | 0.5733634578799769 | 0.13860425623103106 | ||
CA_P0101 | hypothetical protein | 0.6639999999999999 | 0.6209251785159888 | 0.411 | 0.4094165813715456 | 0.5263354399718836 | 0.13524179942543763 | ||
CA_P0102 | Membrane protein | 0.1095 | 0.09655771737556124 | 0.1225 | 0.08394191219675984 | 0.10312490739308026 | 0.01660473134081345 | ||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 0.733 | 0.5107252298263534 | 0.711 | 0.3293265272517701 | 0.5710129392695309 | 0.18963395852710238 | ||
CA_P0104 | arsb Heavy metal resistance membrane protein | 0.601 | 0.6489292667099287 | 0.6025 | 0.36737692872887584 | 0.5549515488597011 | 0.12701360114547103 | ||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 0.4445 | 0.5457025920873124 | 0.398 | 0.44964028776978415 | 0.4594607199642742 | 0.06200899030557114 | ||
CA_P0108 | Predicted HTH containing transcriptional regulator | 1.0405 | 0.8126777732629011 | 0.9059999999999999 | 0.7320644216691068 | 0.872810548733002 | 0.1324722797554954 | ||
CA_P0110 | NH2-acetyltransferase | 1.29 | 1.4074595355383532 | 0.654 | 0.8028904054596547 | 1.038587485249502 | 0.3663948185994026 | ||
CA_P0111 | NH2-acetyltransferase | 1.363 | 1.8281535648994514 | 0.469 | 1.220051188299817 | 0.6907607221893789 | |||
CA_P0112 | hypothetical protein | 0.267 | 0.24663953631767171 | 0.184 | 0.1697648756472286 | 0.2168511029912251 | 0.04725311419885985 | ||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 1.0339999999999998 | 0.7246376811594204 | 2.043 | 0.891662951404369 | 1.1733251581409474 | 0.5934082015378999 | ||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 0.355 | 0.36094567767550984 | 0.6619999999999999 | 0.7215007215007215 | 0.5248615997940578 | 0.19424664527792485 | ||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 0.165 | 0.1679684219366759 | 0.279 | 0.2787456445993031 | 0.22267851663399474 | 0.06489899349428342 | ||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 0.1245 | 0.12394645513138325 | 0.2225 | 0.19303156066016794 | 0.16599450394788778 | 0.049711520418359016 | ||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.1395 | 0.16242995208316416 | 0.1785 | 0.1580403002765705 | 0.1596175630899337 | 0.016038080290065253 | ||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.0925 | 0.0898069151324652 | 0.1515 | 0.12122681537156019 | 0.11375843262600635 | 0.028900973435956795 | ||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 0.094 | 0.10471752447772134 | 0.1555 | 0.12634238787113078 | 0.12013997808721304 | 0.027141306567280508 | ||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 0.34 | 0.4024144869215292 | 0.287 | 0.34313816230717636 | 0.057771203854858476 | |||
CA_P0123 | hypothetical protein | 0.7295 | 0.723589001447178 | 1.0745 | 0.7864726700747149 | 0.8285154178804732 | 0.16642276800081074 | ||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 0.9065000000000001 | 0.8012820512820513 | 0.5505 | 0.4025764895330113 | 0.6652146352037657 | 0.23012403327653436 | ||
CA_P0125 | hypothetical protein | 1.3725 | 1.2077294685990336 | 1.5325 | 1.5600624024960998 | 1.4181979677737833 | 0.16286575843687204 | ||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 1.2885 | 1.2070006035003018 | 1.4875 | 1.5936254980079683 | 1.3941565253770676 | 0.1776621472959332 | ||
CA_P0127 | HTH transcriptional regulator TetR family | 1.5485 | 1.2539184952978057 | 1.226 | 1.1820330969267139 | 1.3026128980561298 | 0.1665739438921093 | ||
CA_P0128 | Permease, MDR related | 0.295 | 0.2476166893648632 | 0.049 | 0.04119125097829221 | 0.15820198508578887 | 0.1320672450797133 | ||
CA_P0129 | Glycogen-binding regulatory subunit of S/T protein phosphatase I | 0.194 | 0.20986358866736624 | 0.2235 | 0.24786218862312556 | 0.21880644432262297 | 0.02281520026177667 | ||
CA_P0131 | Permease, MDR related | 1.238 | 1.2135922330097089 | 0.33799999999999997 | 0.5986231667165519 | 0.8470538499315653 | 0.4502010310278794 | ||
CA_P0132 | hypothetical protein | 1.097 | 1.6406890894175552 | 0.6105006105006106 | 1.1160632333060552 | 0.5153587397836222 | |||
CA_P0133 | Antibiotic-resistance protein, alpha/beta superfamily hydrolase | 0.7195 | 0.7132667617689015 | 1.0375 | 1.1655011655011656 | 0.9089419818175168 | 0.22841981451372254 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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CAC0864 | Histidine kinase-like ATPase | 131.5 | 211 | ||||||||
CAC0865 | Two-component response regulator | 60 | 100 | ||||||||
CAC0867 | Putative permease, ortholog yfkN B,subtilis | 108 | 96.5 | ||||||||
CAC0868 | Predicted membrane protein | 125.5 | 125 | ||||||||
CAC0869 | Thioredoxine reductase | 3517 | 1782.5 | ||||||||
CAC0870 | hypothetical protein | 237.5 | 252 | ||||||||
CAC0872 | Xanthine permease | 1001 | 1195.5 | ||||||||
CAC0873 | xpt xanthine phosphoribosyltransferase | 1097.5 | 863.5 | ||||||||
CAC0875 | Predicted permease | 497.5 | 526 | ||||||||
CAC0876 | Transcriptional regulator, MarR/EmrR family | 897 | 890.5 | ||||||||
CAC0877 | cfa Cyclopropane fatty acid synthase | 11772.5 | 11679.5 | ||||||||
CAC0878 | Amino acid ABC transporter permease component | 330.5 | 1179.5 | ||||||||
CAC0879 | ABC-type polar amino acid transport system, ATPase component | 691 | 2257 | ||||||||
CAC0880 | Periplasmic amino acid binding protein | 486.5 | 1994.5 | ||||||||
CAC0881 | hypothetical protein | 152 | 143.5 | ||||||||
CAC0882 | Predicted membrane protein, hemolysin III homolog | 1978 | 2026 | ||||||||
CAC0883 | Probable cation efflux pump (multidrug resistance protein) | 1091.5 | 1025 | ||||||||
CAC0885 | ferredoxin 3-like protein | 853.5 | 769.5 | ||||||||
CAC0887 | adeC Adenine deaminase | 227 | 203.5 | ||||||||
CAC0888 | Phosphoglycerol transferase MdoB related protein, alkaline phosphatase superfamily | 1135.5 | 746 | ||||||||
CAC0890 | hypothetical protein | 162.5 | 114.5 | ||||||||
CAC0891 | hypothetical protein | 307.5 | 253.5 | ||||||||
CAC0892 | 3-deoxy-7-phosphoheptulonate synthase | 6408 | 3810.5 | ||||||||
CAC0893 | Prephenate dehydrogenase | 1894.5 | 1254.5 | ||||||||
CAC0894 | aroB 3-dehydroquinate synthetase | 1913 | 1105.5 | ||||||||
CAC0895 | aroA 3-phosphoshikimate 1-carboxyvinyltransferase | 1025.5 | 751.5 | ||||||||
CAC0896 | aroC chorismate synthase | 1626.5 | 1035 | ||||||||
CAC0897 | aro Fusion chorismate mutase and shikimate 5-dehydrogenase | 2041 | 1175.5 | ||||||||
CAC0898 | aroK Shikimate kinase | 1383.5 | 804.5 | ||||||||
CAC0900 | Possible Zn-finger containing protein | 383 | 289 | ||||||||
CAC0901 | Probably O-sialoglycoprotein endopeptidase | 548 | 466.5 | ||||||||
CAC0902 | Predicted membrane protein | 375.5 | 415.5 | ||||||||
CAC0903 | Sensory transduction histidine kinase | 536 | 655 | ||||||||
CAC0904 | ATPase with chaperon activity, two ATP-binding domains, ClpC orthologs | 2730.5 | 2658.5 | ||||||||
CAC0905 | Uncharacterized NAD(FAD)-dependent dehydrogenase | 911 | 919.5 | ||||||||
CAC0906 | Alanyl-tRNA synthetase related protein | 1733 | 1344.5 | ||||||||
CAC0907 | hypothetical protein | 1938.5 | 1797.5 | ||||||||
CAC0908 | Dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1 | 714 | 471.5 | ||||||||
CAC0909 | Methyl-accepting chemotaxis protein, contain HAMP domain | 2339 | 1392 | ||||||||
CAC0910 | Probably cellulosomal scaffolding protein precursor, secreted, cellulose-binding and cohesin domain | 35612.5 | 183 | ||||||||
CAC0911 | Possible processive endoglucanase family 48, secreted, CelF ortholog, dockerin domain | 33815.5 | 196.5 | ||||||||
CAC0912 | Possible non-processive endoglucanase family 5, secreted, CelA homolog secreted, dockerin domain | 49317.5 | 250.5 | ||||||||
CAC0913 | Possible non-processive endoglucanase family 9, secreted, CelG ortholog, dockerin and cellulose-binding domain | 15133.5 | 54.5 | ||||||||
CAC0914 | Cellulosome integrating cohesin-containing protein, secreted | 7991 | 19.5 | ||||||||
CAC0915 | Endoglucanase A precursor (endo-1,4-beta-glucanase) (cellulase A), secreted, dockerin domain | 5186.5 | 16 | ||||||||
CAC0918 | Possible non-processive endoglucanase family 5, ortholog of mannase A, secreted, dockerin domain | 7912 | 9 | ||||||||
CAC0919 | Probably secreted sialidase, several ASP-boxes and dockerin domain | 10628.5 | 80 | ||||||||
CAC0920 | Protein related to MIFH/DOPD protein family, function in bacteria is unknown | 1528 | 979.5 | ||||||||
CAC0932 | hypothetical protein | 314.5 | 457 | ||||||||
CAC0933 | xylR transcriptional regulator of NagC/XylR family (xylose repressor) | 47 | 83 | ||||||||
CAC0935 | hisZ ATP phosphoribosyltransferase regulatory subunit | 5608 | 5176.5 | ||||||||
CAC0936 | hisG ATP phosphoribosyltransferase | 4029 | 3826 | ||||||||
CAC0937 | hisD Histidinol dehydrogenase | 5386.5 | 5796.5 | ||||||||
CAC0938 | hisB Imidazoleglycerol-phosphate dehydratase | 5050 | 5970.5 | ||||||||
CAC0939 | hisH Glutamine amidotransferase | 3737 | 4576 | ||||||||
CAC0940 | hisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase | 5041 | 6566.5 | ||||||||
CAC0941 | hisF Imidazoleglycerol-phosphate synthase | 6470.5 | 8341.5 | ||||||||
CAC0942 | hisI_1 Phosphoribosyl-AMP cyclohydrolase | 5656.5 | 6530.5 | ||||||||
CAC0943 | his_2 Phosphoribosyl-ATP pyrophosphohydrolase | 2857.5 | 3659 | ||||||||
CAC0944 | tkt Transketolase | 6294.5 | 6334 | ||||||||
CAC0945 | ssb Single-stranded DNA-binding protein | 194.5 | 91 | ||||||||
CAC0946 | ComE-like protein, Metallo beta-lactamase superfamily hydrolase, secreted | 9103 | 21910 | ||||||||
CAC0947 | Predicted membrane protein, hemolysin III homolog | 140 | 149 | ||||||||
CAC0948 | Uncharacterized protein, DegV family | 3090.5 | 3581 | ||||||||
CAC0949 | Predicted transcriptional regulator | 2531.5 | 2958 | ||||||||
CAC0950 | Predicted membrane protein | 1437 | 1538.5 | ||||||||
CAC0951 | Ferric uptake regulation protein | 1815.5 | 1609.5 | ||||||||
CAC0953 | hypothetical protein | 1925.5 | 1953 | ||||||||
CAC0954 | Uncharacterized membrane protein | 2545 | 2287.5 | ||||||||
CAC0956 | hypothetical protein | 115 | 122 | ||||||||
CAC0957 | Xre family DNA-binding domain and TPR-repeat-containing protein | 6296.5 | 6529 | ||||||||
CAC0958 | Xre family DNA-binding domain and TPR-repeat-containing protein | 5545.5 | 6034 | ||||||||
CAC0959 | clpB ATPase with chaperone activity, two ATP-binding domains | 5401 | 3373 | ||||||||
CAC0961 | Cobyric acid synthase CobQ | 920 | 1085.5 | ||||||||
CAC0962 | UDP-N-acetylmuramyl tripeptide synthetase | 1210 | 1264 | ||||||||
CAC0963 | uppP undecaprenyl pyrophosphate phosphatase | 514.5 | 552.5 | ||||||||
CAC0964 | hypothetical protein | 195 | 184.5 | ||||||||
CAC0965 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 877 | 539.5 | ||||||||
CAC0967 | Probably membrane protein | 187.5 | 189.5 | ||||||||
CAC0968 | hypothetical protein | 382 | 244 | ||||||||
CAC0969 | hypothetical protein | 590 | 752.5 | ||||||||
CAC0970 | Isopropylmalate synthase | 2294 | 1463.5 | ||||||||
CAC0971 | citB aconitate hydratase | 7816.5 | 5470 | ||||||||
CAC0972 | citC Isocitrate dehydrogenase | 14191.5 | 6799.5 | ||||||||
CAC0973 | argG argininosuccinate synthase | 2087.5 | 5060.5 | ||||||||
CAC0974 | argH Argininosuccinate lyase | 971.5 | 2289 | ||||||||
CAC0975 | Predicted P-loop kinase or ATPase distantly related to phosphoenolpyruvate carboxykinase | 539 | 676 | ||||||||
CAC0976 | Uncharacterized conserved protein, ortholog yuzA B,subtilis | 1667.5 | 1849 | ||||||||
CAC0977 | asnC Transcriptional regulator, Lrp family | 1157 | 1091.5 | ||||||||
CAC0978 | Possible elongation subunit of DNA-dependent DNA polymerase | 1476 | 1474.5 | ||||||||
CAC0979 | Uncharacterized protein containing two CBS domains | 2621 | 2060 | ||||||||
CAC0980 | pflB Pyruvate-formate lyase | 1256 | 1784 | ||||||||
CAC0981 | pflA Pyruvate-formate-lyase-activating enzyme | 2510.5 | 3221.5 | ||||||||
CAC0982 | hypothetical protein | 112 | 55.5 | ||||||||
CAC0983 | hypothetical protein | 148 | 247.5 | ||||||||
CAC0984 | ABC transporter, ATP-binding protein | 559.5 | 5097 | ||||||||
CAC0985 | ABC transporter, permease component | 816 | 6568.5 | ||||||||
CAC0986 | Lipoprotein, attached to the cytoplasmic membrane, NLPA family | 1042.5 | 7113.5 | ||||||||
CAC0990 | gltX Glutamyl-tRNA synthetase | 5445 | 4533.5 | ||||||||
CAC0991 | Putative intracellular protease | 455.5 | 153 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |