Selected Cell
Cell:
Value:
Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC0505 | Cell division membrane protein | 0.8115 | 1.0515247108307046 | 0.5505 | 0.3683919690550746 | 0.6954791699714449 | 0.29901742251090335 | ||
CAC0506 | Penicillin-binding protein | 1.0145 | 0.8745080891998251 | 0.706 | 0.45620437956204374 | 0.7628031171904672 | 0.2401795867162348 | ||
CAC0507 | Predicted metal-dependent membrane hydrolase | 0.8420000000000001 | 0.9652509652509652 | 0.499 | 0.5414185165132648 | 0.7119173704410575 | 0.227671595797181 | ||
CAC0508 | uvrC excinuclease ABC subunit C | 0.973 | 0.8230452674897119 | 2.509 | 1.137009664582149 | 1.3605137330179653 | 0.7763190964993076 | ||
CAC0509 | hypothetical protein | 1.1560000000000001 | 1.02880658436214 | 1.7825 | 1.4367816091954024 | 1.3510220483893856 | 0.33435725883751893 | ||
CAC0510 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 1.1505 | 1.2239902080783354 | 2.1665 | 1.4524328249818446 | 1.498355758265045 | 0.46361108961870007 | ||
CAC0511 | hypothetical protein | 1.116 | 1.349527665317139 | 1.3805 | 1.196888090963495 | 1.2607289390701584 | 0.12550224501404922 | ||
CAC0512 | hypothetical protein | 1.3610000000000002 | 1.2894906511927786 | 1.6895 | 1.0706638115631693 | 1.352663615688987 | 0.25628301938113623 | ||
CAC0513 | Uncharacterized conserved protein, similar to B,subtilis yvcL | 1.127 | 1.0245901639344261 | 2.2235 | 1.350438892640108 | 1.4313822641436336 | 0.5453227522505661 | ||
CAC0514 | CBS domain, similar to B,subtilis ytoI | 0.8035 | 0.7561436672967864 | 2.077 | 1.8348623853211008 | 1.3678765131544717 | 0.6864570507809722 | ||
CAC0515 | hypothetical protein | 0.8995 | 0.9229349330872174 | 1.693 | 1.572327044025157 | 1.2719404942780936 | 0.41953942609644007 | ||
CAC0516 | dnaE DNA polymerase III subunit alpha | 0.787 | 1.0928961748633879 | 1.8295 | 1.7152658662092626 | 1.3561655102681627 | 0.49875134948857075 | ||
CAC0517 | pfkA 6-phosphofructokinase | 1.0695000000000001 | 0.978952520802741 | 1.6735 | 1.097694840834248 | 1.2049118404092474 | 0.31647239423924883 | ||
CAC0518 | pykA Pyruvate kinase (pykA) | 1.8115 | 1.0542962572482868 | 4.412 | 1.7605633802816902 | 2.2595899093824943 | 1.4759645467404114 | ||
CAC0519 | pyrC dihydroorotase | 0.96 | 0.8371703641691083 | 1.9635000000000002 | 1.1743981209630066 | 1.2337671212830288 | 0.5060540738328371 | ||
CAC0522 | Predicted hydrolase of the HAD superfamily | 1.11 | 1.1086474501108647 | 1.245 | 1.4716703458425313 | 1.233829448988349 | 0.1709749871628657 | ||
CAC0523 | SAM-dependent methyltransferase related to tRNA(uracyl-5-)-methyltransferase (trmA family) | 0.7095 | 1.3633265167007498 | 1.205 | 0.9337068160597571 | 1.0528833331901268 | 0.2896144599622296 | ||
CAC0524 | Response regulator (CheY-like and HTH domains) | 1.018 | 1.2106537530266344 | 0.632 | 0.693721817551162 | 0.8885938926444491 | 0.2734252156647247 | ||
CAC0525 | Sensory transduction histidine kinase (HisKA and HATPase_c domains) | 0.88 | 1.2928248222365868 | 0.717 | 0.5971931919976112 | 0.8717545035585494 | 0.303700000911484 | ||
CAC0526 | ABC transporter, ATPase component | 1.0815000000000001 | 1.2399256044637321 | 0.779 | 0.5518763796909493 | 0.9130754960386703 | 0.30748379209344007 | ||
CAC0527 | Predicted permease, domain duplication | 1.3014999999999999 | 1.400560224089636 | 0.5 | 0.6686726847208292 | 0.9676832272026163 | 0.4497966346979083 | ||
CAC0528 | ABC transporter, ATPase component (two ATPase domains) | 1.3775 | 1.5163002274450341 | 0.85 | 0.34614053305642095 | 1.0224851901253638 | 0.5345035211208128 | ||
CAC0529 | Acetylxylan esterase related enzyme | 1.1265 | 1.5174506828528072 | 1.122 | 1.041124414367517 | 1.2017687743050811 | 0.2140795206643307 | ||
CAC0531 | Transcriptional regulator, RpiR family | 1.901 | 1.722652885443583 | 4.535500000000001 | 2.706359945872801 | 2.7163782078290963 | 1.286032153366378 | ||
CAC0535 | Metal-dependent hydrolase of the beta-lactamase superfamily II | 0.675 | 1.699235344095157 | 0.958 | 1.2903225806451613 | 1.1556394811850796 | 0.4411015283167417 | ||
CAC0536 | dltE Short-chain dehydrodenase (gene dltE) | 0.88 | 0.9363295880149812 | 0.918 | 1.0482180293501049 | 0.9456369043412716 | 0.07229918173430258 | ||
CAC0537 | Acetylxylan esterase, acyl-CoA esterase or GDSL lipase family, strong similarity to C-terminal region of endoglucanase E precursor | 0.463 | 0.5344735435595938 | 0.344 | 0.36185996019540445 | 0.4258333759387496 | 0.08939303347986886 | ||
CAC0538 | Beta-mannanase ManB-like enzyme, contains ChW-repeats | 0.35450000000000004 | 0.33846674564224066 | 0.235 | 0.22187708009762594 | 0.28746095643496666 | 0.06867610132662455 | ||
CAC0539 | manB Beta-mannanase ManB, contains ChW-repeats | 1.2775 | 1.4347202295552366 | 0.755 | 0.7437709185570844 | 1.0527477870280801 | 0.3561539713926172 | ||
CAC0540 | Beta-mannanase ManB-like enzyme, contains ChW-repeats | 1.407 | 1.3568521031207599 | 0.905 | 1.0799136069114472 | 1.187191427508052 | 0.23681292612615612 | ||
CAC0542 | Methyl-accepting chemotaxis protein | 1.2045 | 1.0970927043335161 | 2.0785 | 1.1799410029498527 | 1.3900084268208421 | 0.46128876198910423 | ||
CAC0543 | Methyl-accepting chemotaxis protein | 0.859 | 0.8130081300813008 | 1.3344999999999998 | 0.8382229673093042 | 0.9611827743476512 | 0.24958759964690855 | ||
CAC0546 | Uncharacterized membrane protein, homolog of Methanobacterium (2621593) | 1.466 | 1.6181229773462784 | 0.782 | 0.9233610341643583 | 1.1973710028776592 | 0.40694319632271914 | ||
CAC0547 | Lactoylglutation lyase | 0.719 | 0.7024938531787847 | 0.6415 | 0.6188118811881188 | 0.6704514335917259 | 0.047918364025888185 | ||
CAC0548 | Predicted metal-dependent hydrolase | 1.6895 | 1.607717041800643 | 0.7889999999999999 | 0.8703220191470844 | 1.2391347652369318 | 0.4751581799195309 | ||
CAC0549 | Predicted transcriptional regulator | 1.202 | 1.1587485515643106 | 1.2515 | 1.1655011655011653 | 1.194437429266369 | 0.04252188772523375 | ||
CAC0550 | Possible sigma factor | 2.0004999999999997 | 1.6778523489932886 | 1.794 | 1.0582010582010584 | 1.6326383517985867 | 0.40553761993421017 | ||
CAC0552 | Protein containing cell-adhesion domain | 1.236 | 1.0030090270812437 | 0.9535 | 0.5 | 0.9231272567703109 | 0.30780384968209046 | ||
CAC0553 | Hypothetical protein, CF-8 family | 1.465 | 1.146131805157593 | 1.0245 | 0.49007596177407503 | 1.031426941732917 | 0.4058947599943101 | ||
CAC0554 | lyc Autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolase , peptodoglycan-binding domain | 1.2685 | 1.1474469305794608 | 0.729 | 0.5599104143337066 | 0.9262143362282917 | 0.3362416759992277 | ||
CAC0555 | Predicted membrane protein | 0.9604999999999999 | 0.7225433526011561 | 0.6645000000000001 | 0.36503011498448623 | 0.6781433668964106 | 0.24489635696984585 | ||
CAC0556 | Uncharacterised conserved protein | 1.08 | 1.0251153254741159 | 1.0245 | 0.9229349330872174 | 1.013137564640333 | 0.06552269757681434 | ||
CAC0557 | Predicted Zn-dependent protease with possible chaperone function | 1.5355 | 1.4430014430014428 | 0.8985 | 0.9643201542912248 | 1.2103303993231669 | 0.3253871142569475 | ||
CAC0558 | hypothetical protein | 1.163 | 1.2706480304955527 | 1.141 | 1.1396011396011396 | 1.178562292524173 | 0.06231871132360916 | ||
CAC0559 | Transcriptional regulator, MarR/EmrR family | 1.2875 | 0.9191176470588235 | 1.573 | 0.6997900629811057 | 1.1198519275099823 | 0.3873823577082282 | ||
CAC0560 | Integral membrane protein similar to antibiotic resistance protein B,subtilis | 1.0145 | 1.124859392575928 | 0.639 | 0.4670714619336758 | 0.8113577136274011 | 0.3097258442388536 | ||
CAC0561 | Cellulase CelE ortholog, dockerin domain | 0.044 | 0.04570070607590888 | 0.108 | 0.07076890414351933 | 0.06711740255485706 | 0.029876464687488887 | ||
CAC0562 | Predicted membrane protein | 2.081 | 2.0181634712411705 | 0.9505 | 0.7049700387733522 | 1.4386583775036306 | 0.7129810875413167 | ||
CAC0563 | Predicted membrane protein | 2.5955000000000004 | 2.2573363431151243 | 0.994 | 0.6367398917542184 | 1.6208940587173357 | 0.9515725769060578 | ||
CAC0564 | Response regulator (REC, HTH domains) | 1.633 | 1.1286681715575622 | 2.2415000000000003 | 1.4513788098693758 | 1.6136367453567346 | 0.4676570528934766 | ||
CAC0565 | Histidine kinase (HAMP, HisKA and HATPase domains) | 1.3645 | 1.2961762799740766 | 1.6179999999999999 | 1.1337868480725624 | 1.3531157820116597 | 0.2013624737578553 | ||
CAC0566 | Malate dehydrogenase | 1.1284999999999998 | 0.8783487044356609 | 2.002 | 0.9237875288683602 | 1.2331590583260053 | 0.5239818834497347 | ||
CAC0567 | Putative methyltransferase | 1.05 | 0.9487666034155597 | 2.4155 | 1.1904761904761905 | 1.4011856984729376 | 0.683434081538965 | ||
CAC0568 | asd aspartate-semialdehyde dehydrogenase | 1.029 | 0.8038585209003214 | 0.875 | 0.835421888053467 | 0.8858201022384471 | 0.09979184760279886 | ||
CAC0569 | sacT SACPA operon antiterminator (sacT) | 1.2805 | 0.9920634920634921 | 4.041 | 2.544529262086514 | 2.214523188537502 | 1.3918487199427167 | ||
CAC0570 | PTS enzyme II, ABC component | 0.422 | 0.4757373929590866 | 1.1465 | 0.40551500405515 | 0.6124380992535591 | 0.35730147583616634 | ||
CAC0571 | Predicted transcriptional regulator | 2.169 | 1.7667844522968197 | 3.0925 | 1.4492753623188408 | 2.119389953653915 | 0.7124578406487417 | ||
CAC0572 | Predicted membrane protein | 2.5605 | 2.1164021164021167 | 2.1515 | 1.5649452269170578 | 2.0983368358297936 | 0.40875994387948617 | ||
CAC0573 | Uncharacterized protein, homolog YvqG B,subtilis | 2.1985 | 1.7921146953405016 | 2.283 | 1.4524328249818446 | 1.9315118800805866 | 0.38461013627236923 | ||
CAC0574 | Pectate lyase H (FS) | 0.0825 | 0.07799095304944627 | 0.194 | 0.13820744938152166 | 0.12317460060774199 | 0.05458390752654665 | ||
CAC0577 | Endo-arabinase related enzyme (family 43 glycosyl hydrolase domain and ricin B-like domain) | 0.3345 | 0.33858134416793634 | 0.381 | 0.319030148349019 | 0.34327787312923885 | 0.026520554629874234 | ||
CAC0579 | prkA Serine protein kinase (prkA protein), P-loop containing | 3.1105 | 2.4479804161566707 | 1.632 | 2.396826805385557 | 0.7405761820509703 | |||
CAC0582 | Cobyrinic acid a,c-diamide synthase CobB/CbiA (CBIB protein) | 1.1155 | 1.0261672652642382 | 1.8675 | 1.196888090963495 | 1.3015138390569332 | 0.38371159549990913 | ||
CAC0583 | CBIK protein (chain A, anaerobic cobalt chelatase) | 1.4115000000000002 | 1.1019283746556474 | 2.8075 | 1.2836970474967908 | 1.6511563555381095 | 0.7812902812842462 | ||
CAC0584 | Precorrin-6B methylase 1 CobL1/CbiE | 1.1604999999999999 | 1.0389610389610389 | 2.435 | 1.2277470841006752 | 1.4655520307654286 | 0.6510036286314703 | ||
CAC0585 | N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain | 1.6915 | 1.3089005235602094 | 1.671 | 1.2048192771084336 | 1.4690549501671608 | 0.24881956958521992 | ||
CAC0586 | CheX protein (uncharacterized ORF in chemotaxis operon) | 1.092 | 1.0427528675703859 | 0.638 | 1.3386880856760375 | 1.0278602383116058 | 0.2903679594062635 | ||
CAC0587 | flavodoxin | 0.4845 | 0.4098360655737705 | 1.8075 | 0.5202913631633715 | 0.8055318571842855 | 0.669561774962383 | ||
CAC0588 | hypothetical protein | 0.49 | 0.4316857327865314 | 1.1709999999999998 | 0.49431537320810676 | 0.6467502764986596 | 0.35066488250985134 | ||
CAC0589 | birA Biotin-(acetyl-CoA carboxylase)ligase | 1.3495 | 1.1792452830188678 | 1.246 | 1.124859392575928 | 1.224901168898699 | 0.0967175377253061 | ||
CAC0590 | ribD Riboflavin biosynthesis protein RIBD (pirimidine deaminase and pirimidine reductase) | 1.291 | 0.9765625 | 1.496 | 0.7665772326561902 | 1.1325349331640475 | 0.3242789286429704 | ||
CAC0591 | ribB riboflavin synthase subunit alpha | 1.569 | 1.3386880856760375 | 1.6595 | 0.6934812760055479 | 1.315167340420396 | 0.43590625432059116 | ||
CAC0592 | ribA Riboflavin biosynthes protein RIBA (GTPcyclohydrolase/3,4-dihydroxy-2-butanone 4-phosphate synthase) | 1.68 | 1.4174344436569808 | 1.666 | 0.8295313148071339 | 1.3982414396160285 | 0.39786183132372743 | ||
CAC0593 | ribH riboflavin synthase subunit beta | 1.442 | 1.5835312747426762 | 1.7229999999999999 | 0.7432181345224824 | 1.3729373523162898 | 0.435204779397081 | ||
CAC0594 | pyridoxine biosynthesis protein | 0.966 | 0.9310986964618249 | 2.1414999999999997 | 1.0911074740861975 | 1.2824265426370056 | 0.5768209437714201 | ||
CAC0595 | Glutamine amidotranspherase (possibly involved in histidine and purine biosinthesis) | 0.537 | 0.6112469437652811 | 1.599 | 1.2254901960784312 | 0.993184284960928 | 0.5082515621793828 | ||
CAC0599 | Transcriptional regulator, GntR family | 1.1735 | 1.1229646266142617 | 1.3519999999999999 | 1.0863661053775122 | 1.1837076829979434 | 0.11774492542012711 | ||
CAC0601 | Unchracterized membrane protein, possible permease | 0.972 | 0.9433962264150942 | 1.5035 | 1.0335917312661498 | 1.113121989420311 | 0.26295899783798543 | ||
CAC0602 | ftsH ATP-dependent zinc metallopeptidase FtsH (cell dividion protein) | 0.982 | 0.8841732979664014 | 1.337 | 0.9045680687471731 | 1.0269353416783935 | 0.21096131389530332 | ||
CAC0603 | Superfamily I DNA and RNA helicase | 1.1804999999999999 | 0.9324009324009324 | 2.08 | 1.0411244143675171 | 1.3085063366921124 | 0.524257081427483 | ||
CAC0604 | Acyl carrier protein phosphodiesterase | 0.9590000000000001 | 0.7521624670928921 | 1.7810000000000001 | 0.7331378299120235 | 1.056325074251229 | 0.49382547679111666 | ||
CAC0605 | Predicted phosphatase | 0.569 | 0.5803830528148578 | 0.9115 | 0.7827788649706459 | 0.7109154794463759 | 0.1659088241309513 | ||
CAC0606 | C-terminal region cation efflux system protein CZCD | 1.136 | 1.941747572815534 | 0.3755 | 0.7895775759968418 | 1.060706287203094 | 0.6645603369154118 | ||
CAC0607 | putative aminopeptidase 2 | 1.158 | 1.1267605633802817 | 1.0495 | 1.2300123001230012 | 1.1410682158758207 | 0.07480459548007094 | ||
CAC0608 | lisA Diaminopimelate decarboxilase, lisA | 0.4375 | 0.39769337840524954 | 0.808 | 0.4407227853680035 | 0.5209790409433133 | 0.19234535117946444 | ||
CAC0609 | Cyclic beta 1-2 glucan synthetase | 0.32599999999999996 | 3.571428571428571 | 0.6445000000000001 | 1.5139761904761906 | 1.7889084066589227 | |||
CAC0610 | hypothetical protein | 0.975 | 1.0520778537611783 | 0.7675 | 0.7059654076950229 | 0.8751358153640504 | 0.16480840988364037 | ||
CAC0611 | Predicted membrane protein, YohK family | 0.8405 | 0.998003992015968 | 0.6415 | 0.5108556832694764 | 0.7477149188213611 | 0.21497100416598278 | ||
CAC0612 | Predicted membrane protein YohJ family | 0.819 | 0.9250693802035153 | 0.5945 | 0.471253534401508 | 0.7024557286512558 | 0.20675936013972232 | ||
CAC0616 | Predicted membrane protein | 1.3319999999999999 | 1.461988304093567 | 1.0482180293501049 | 1.280735444481224 | 0.21159513476146735 | |||
CAC0617 | Hypothetical protein, CF-25 family | 1.271 | 0.8932559178204557 | 1.596 | 1.3540961408259988 | 1.2785880146616135 | 0.29154202005647 | ||
CAC0619 | Nitrate ABC transporter ATP binding protein | 0.8965000000000001 | 0.7704160246533127 | 0.6755 | 0.8368200836820083 | 0.7948090270838303 | 0.09475520277782103 | ||
CAC0621 | Exopolyphosphatase | 0.9595 | 0.9285051067780873 | 0.68 | 1.2578616352201257 | 0.9564666854995534 | 0.23668811742433665 | ||
CAC0625 | Possible periplasmic aspartyl protease | 0.889 | 1.0167768174885614 | 1.6135000000000002 | 1.5600624024960998 | 1.2698348049961654 | 0.37032027505276743 | ||
CAC0626 | trpS tryptophanyl-tRNA synthetase | 0.8005 | 0.7704160246533127 | 1.14 | 1.1025358324145533 | 0.9533629642669664 | 0.19486969685499894 | ||
CAC0627 | Transcriptional regulator, MarR/EmrR family | 1.0175 | 0.9246417013407303 | 1.7055 | 1.2594458438287153 | 1.2267718862923616 | 0.3489630187696253 | ||
CAC0628 | Putative Mn transporter, NRAMR family | 0.7525 | 0.7824726134585289 | 0.5825 | 0.5625879043600563 | 0.6700151294546463 | 0.11350469322507421 | ||
CAC0629 | Predicted hydrolase of the HAD family | 0.8105 | 0.7309941520467836 | 1.0855000000000001 | 0.9070294784580498 | 0.8835059076262084 | 0.15269214111717033 | ||
CAC0630 | Peptide chain ralease factor 3 (RF-3) | 0.9815 | 0.8810572687224669 | 2.1115000000000004 | 1.4134275618374559 | 1.346871207639981 | 0.5596325233139294 | ||
CAC0631 | Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain (EAL) | 0.9345 | 0.9341429238673516 | 0.73 | 0.5078720162519046 | 0.776628735029814 | 0.2034194916973163 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |