Selected Cell
Cell:
Value:
Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC1711 | engA GTP-binding protein EngA | 0.911 | 0.8159934720522236 | 2.1605 | 1.129305477131564 | 1.2541997372959468 | 0.6182743546836102 | ||
CAC1712 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | 0.7795000000000001 | 0.7809449433814917 | 2.122 | 1.2414649286157666 | 1.2309774679993146 | 0.6325589081100291 | ||
CAC1713 | Coat morphogenesis sporulation protein spoIVA | 0.836 | 1.017293997965412 | 1.89 | 1.639344262295082 | 1.3456595650651235 | 0.5000446741412972 | ||
CAC1714 | ansA L-asparaginase | 0.7075 | 0.6578947368421053 | 1.1425 | 1.0758472296933836 | 0.8959354916338722 | 0.248551554495614 | ||
CAC1715 | PLP-dependent aminotransferase | 0.6745 | 0.7358351729212657 | 0.991 | 0.8532423208191126 | 0.8136443734350945 | 0.139568912553983 | ||
CAC1716 | Uncharacterized stress-induced protein, YicC family | 1.1139999999999999 | 0.9601536245799327 | 3.2615 | 1.3324450366422387 | 1.6670246653055427 | 1.073902240975762 | ||
CAC1717 | hypothetical protein | 1.3695 | 1.0816657652785289 | 3.182 | 1.3995801259622116 | 1.758186472810185 | 0.959965435848796 | ||
CAC1718 | guanylate kinase | 1.3845 | 0.9523809523809523 | 3.1375 | 1.3917884481558804 | 1.7165423501342083 | 0.9693263130754132 | ||
CAC1719 | rpoZ DNA-directed RNA polymerase omega subunit | 0.9335 | 0.9170105456212746 | 2.0060000000000002 | 1.597444089456869 | 1.363488658769536 | 0.5328504853923914 | ||
CAC1720 | phosphopantothenoylcysteine synthase/decarboxylase | 0.8325 | 0.8684324793747287 | 1.8245 | 1.6168148746968471 | 1.285561838517894 | 0.5097204618415498 | ||
CAC1721 | rpiA primosome assembly protein PriA | 0.9985 | 0.7135212272565109 | 1.7795 | 0.6583278472679395 | 1.0374622686311126 | 0.5166619658607283 | ||
CAC1722 | def peptide deformylase | 1.0194999999999999 | 0.9233610341643583 | 1.8835000000000002 | 0.8176614881439085 | 1.1610056305770666 | 0.48866556787513227 | ||
CAC1723 | fmt methionyl-tRNA formyltransferase | 0.8545 | 0.7886435331230284 | 1.7405 | 0.7567158531971245 | 1.0350898465800382 | 0.47203249988543394 | ||
CAC1724 | Predicted metal-dependent peptidase | 0.6475 | 0.8830022075055187 | 1.081 | 0.7307270734380709 | 0.8355573202358975 | 0.19048015007327349 | ||
CAC1725 | Predicted rRNA methylase, SUN family | 0.843 | 0.7803355442840422 | 1.6325 | 0.9564801530368244 | 1.0530789243302165 | 0.39309973770553264 | ||
CAC1726 | Predicted Fe-S-cluster redox enzyme, YLON B,subtilis ortholog | 0.9784999999999999 | 0.8904719501335708 | 0.924214417744917 | 0.9310621226261625 | 0.044411740423307734 | |||
CAC1727 | Protein serine/threonine phosphatase, PP2C family (YLOO B,subtilis ortholog) | 1.033 | 0.9149130832570906 | 1.7465 | 1.1435105774728416 | 1.209480915182483 | 0.36998076704275706 | ||
CAC1728 | Serine/threonine protein kinase, Pkn2 family (YLOP B,subtilis ortholog) | 0.9755 | 0.8639308855291576 | 1.5514999999999999 | 0.881445570736007 | 1.0680941140662912 | 0.3259730168429579 | ||
CAC1729 | ribosome-associated GTPase | 0.909 | 0.7501875468867217 | 1.8275 | 0.8190008190008189 | 1.0764220914718852 | 0.5049233839548002 | ||
CAC1730 | ribulose-phosphate 3-epimerase | 0.856 | 0.7331378299120235 | 1.4889999999999999 | 0.9394081728511038 | 1.0043865006907817 | 0.3339994120693755 | ||
CAC1731 | Predicted nucleotide-binding protein, YLOS B,subtilis ortholog | 0.742 | 0.8166598611678236 | 1.593 | 0.9985022466300548 | 1.0375405269494697 | 0.3856560147409355 | ||
CAC1732 | hypothetical protein | 0.833 | 0.8058017727639 | 1.9385 | 1.0917030567685588 | 1.1672512073831147 | 0.5300634511068468 | ||
CAC1734 | Uncharacterized, alkaline shock induced protein | 1.0495 | 0.9389671361502347 | 3.5365 | 1.5760441292356184 | 1.7752528163464634 | 1.2066160162874286 | ||
CAC1735 | Predicted kinase related to hydroxyacetone kinase, YLOV ortholog | 0.889 | 0.8146639511201629 | 2.7315 | 1.937984496124031 | 1.5932871118110485 | 0.9159001451794219 | ||
CAC1736 | recG RecG helicase | 0.8545 | 0.8421052631578947 | 2.1205 | 1.539645881447267 | 1.3391877861512904 | 0.6144497560659679 | ||
CAC1737 | N6-adenine-specific methylase | 1.149 | 1.0050251256281406 | 2.683 | 1.4347202295552366 | 1.5679363387958443 | 0.7645238583965889 | ||
CAC1738 | kdtB Phosphopantetheine adenylyltransferase | 1.195 | 1.2944983818770228 | 1.988 | 1.394700139470014 | 1.4680496303367594 | 0.3560920626244115 | ||
CAC1739 | Uncharacterized conserved protein (coiled-coil) | 0.8915 | 0.7855459544383345 | 1.2695 | 1.179245283018868 | 1.0314478093643007 | 0.22990291450017467 | ||
CAC1740 | Uncharcaterized membrane protein, YLBJ B,subtilis homolog | 0.2705 | 5 | 0.311 | 0.9760858955588092 | 1.6393964738897022 | 2.2636365823677678 | ||
CAC1741 | Uncharacterized conserved protein, YLBM B,subtilis ortholog | 1.232 | 1.1148272017837235 | 1.635 | 1.0476689366160294 | 1.257374034599938 | 0.26302157011836136 | ||
CAC1742 | pta phosphate acetyltransferase | 0.7555000000000001 | 0.7770007770007771 | 1.151 | 0.9818360333824252 | 0.9163342025958006 | 0.18676185417122362 | ||
CAC1743 | askA Acetate kinase | 0.86 | 0.8278145695364238 | 0.957 | 0.9103322712790168 | 0.8887867102038601 | 0.05675544240800744 | ||
CAC1744 | Predicted Zn-finger-like protein, possible nucleic acid binding | 0.8405 | 0.9041591320072334 | 1.1925 | 0.9886307464162135 | 0.9814474696058617 | 0.1532258098021324 | ||
CAC1745 | rpmF Ribosomal protein L32 | 1.9929999999999999 | 2.1119324181626187 | 2.768 | 0.880281690140845 | 1.938303527075866 | 0.783357121748963 | ||
CAC1746 | plsX fatty acid/phospholipid synthesis protein | 0.901 | 0.9813542688910698 | 1.1265 | 0.8764241893076249 | 0.9713196145496736 | 0.11274105469104491 | ||
CAC1747 | acpA Acyl carrier protein, ACP | 1.0194999999999999 | 0.7815552950371238 | 1.127 | 0.7719027402547278 | 0.9249895088229629 | 0.17677613327137645 | ||
CAC1748 | rncS ribonuclease III | 0.5675 | 0.6029544769369912 | 1.063 | 0.7930214115781126 | 0.7566189721287759 | 0.22698989297534874 | ||
CAC1749 | BioB/LipA-like protein | 0.5255000000000001 | 0.4789272030651341 | 1.0059999999999998 | 0.7861635220125788 | 0.6991476812694282 | 0.24520785623720842 | ||
CAC1750 | SpoVS-related protein | 0.5265 | 0.6242197253433209 | 0.584 | 0.651890482398957 | 0.5966525519355695 | 0.0544446067886922 | ||
CAC1751 | smc Chromosome segregation SMC protein, ATPase | 0.8240000000000001 | 0.8810572687224669 | 2.0454999999999997 | 1.0672358591248665 | 1.2044482819618332 | 0.5702390972470638 | ||
CAC1752 | ftsY Signal recognition particle GTPase, FtsY | 1.1945000000000001 | 0.9298000929800094 | 1.7309999999999999 | 1.0946907498631637 | 1.2374977107107932 | 0.34663379556519186 | ||
CAC1753 | hypothetical protein | 0.834 | 0.794912559618442 | 2.549 | 1.5384615384615383 | 1.429093524519995 | 0.8210711855993693 | ||
CAC1754 | ffh Signal recognition particle GTPase Ffh | 0.9105000000000001 | 0.8361204013377925 | 1.8855 | 1.2150668286755772 | 1.2117968075033425 | 0.47812104917054365 | ||
CAC1755 | rpsP Ribosomal protein S16 | 1.5459999999999998 | 1.2944983818770228 | 2.4764999999999997 | 2.232142857142857 | 1.88728530975497 | 0.5579643607819572 | ||
CAC1756 | hypothetical protein | 1.5695000000000001 | 1.2539184952978057 | 2.7 | 2.3014959723820483 | 1.9562286169199634 | 0.6621188078470339 | ||
CAC1757 | rimM 16S rRNA-processing protein | 1.163 | 1.040582726326743 | 1.2085 | 0.8186655751125665 | 1.0576870753598273 | 0.17441252503866198 | ||
CAC1758 | trmD tRNA (guanine-N(1)-)-methyltransferase | 1.0745 | 0.9407337723424269 | 1.25 | 0.7434944237918216 | 1.002182049033562 | 0.2139616796022988 | ||
CAC1759 | rplS 50S ribosomal protein L19 | 0.7495 | 0.7222824124232574 | 1.222 | 1.0427528675703859 | 0.9341338199984108 | 0.24057964825460607 | ||
CAC1760 | Signal peptidase I | 0.8795 | 0.759589821496392 | 1.7189999999999999 | 0.8163265306122448 | 1.043604088027159 | 0.4529197799884475 | ||
CAC1761 | Predicted GTPase, YLQF B,subtilis ortholog | 0.897 | 0.9099181073703367 | 1.427 | 1.0357327809425168 | 1.0674127220782132 | 0.24775773020005662 | ||
CAC1762 | rnhB ribonuclease HII | 0.487 | 0.9573958831977023 | 0.358 | 0.6561679790026247 | 0.6146409655500817 | 0.2590767117431631 | ||
CAC1764 | Predicted glutamine amidotransferase | 0.6495 | 0.6367398917542184 | 0.425 | 0.3779289493575208 | 0.5222922102779348 | 0.14093333985211012 | ||
CAC1767 | hypothetical protein | 0.964 | 0.9629272989889264 | 1.6135 | 0.7671653241273494 | 1.0768981557790689 | 0.3695092763833726 | ||
CAC1768 | Uncharacterized conserved protein, TraB family | 0.504 | 0.6134969325153374 | 0.927 | 0.5812263876780006 | 0.6564308300483346 | 0.1861378175682059 | ||
CAC1772 | sacB1 Levansucrase | 0.629 | 0.794912559618442 | 0.6695 | 1.187648456057007 | 0.8202652539188623 | 0.25490242281275216 | ||
CAC1774 | sacB2 Levansucrase | 0.75 | 0.7012622720897616 | 0.708 | 0.702000702000702 | 0.7153157435226158 | 0.023318863184998272 | ||
CAC1775 | Predicted membrane protein | 0.3735 | 0.37643515904385466 | 0.387 | 0.39769337840524954 | 0.3836571343622761 | 0.011007803345188071 | ||
CAC1776 | HAD superfamily hydrolase | 1.7485 | 1.4781966001478195 | 3.9585 | 2.73224043715847 | 2.4793592593265723 | 1.1237271537015918 | ||
CAC1777 | Nudix (MutT-like) hydrolase | 1.8005 | 1.6920473773265652 | 2.601 | 2.865329512893983 | 2.239719222555137 | 0.5815983754697137 | ||
CAC1778 | Amidase from nicotinamidase family | 1.3585 | 1.7421602787456447 | 1.8775 | 2.6954177897574123 | 1.9183945171257641 | 0.5627248898076395 | ||
CAC1780 | nicotinate phosphoribosyltransferase | 1.655 | 1.3513513513513513 | 2.0202020202020203 | 1.6755177905177903 | 0.3348970574688555 | |||
CAC1781 | Predicted nucleotidyltransferase | 1.9689999999999999 | 1.4825796886582654 | 1.3025 | 1.1771630370806359 | 1.4828106814347253 | 0.3475209975350587 | ||
CAC1783 | gltT Proton/sodium-glutamate symport protein | 0.829 | 0.898876404494382 | 0.6154999999999999 | 0.5154639175257733 | 0.7147100805050388 | 0.17937028193626786 | ||
CAC1784 | smf DNA uptake protein | 0.651 | 0.5503577325261421 | 1.162 | 0.7385524372230428 | 0.7754775424372962 | 0.26890931617744224 | ||
CAC1785 | topA DNA topoisomerase I | 1.197 | 0.974184120798831 | 2.149 | 1.1402508551881414 | 1.3651087439967433 | 0.5310772643813754 | ||
CAC1786 | codY transcriptional repressor CodY | 1.8845 | 1.5209125475285172 | 5.008 | 3.2258064516129035 | 2.9098047497853554 | 1.57929855347276 | ||
CAC1787 | rpsB 30S ribosomal protein S2 | 1.0685 | 0.9345794392523364 | 4.394500000000001 | 2.5348542458808616 | 2.2331084212832994 | 1.6129842313041884 | ||
CAC1788 | tsf elongation factor Ts | 1.2080000000000002 | 1.0471204188481675 | 4.183999999999999 | 2.4125452352231607 | 2.212916413517832 | 1.4484427811389071 | ||
CAC1789 | smbA/pyrH uridylate kinase | 0.9375 | 0.9182736455463728 | 2.566 | 1.841620626151013 | 1.5658485679243466 | 0.79383632193859 | ||
CAC1790 | frr ribosome releasing factor | 1.0575 | 0.771604938271605 | 3.1115 | 1.6433853738701725 | 1.6459975780354443 | 1.0422085620164738 | ||
CAC1791 | Undecaprenyl pyrophosphate synthase | 0.833 | 0.9000900090009001 | 1.41 | 0.8309098462816784 | 0.9934999638206445 | 0.2795195189991777 | ||
CAC1792 | cdsA CDP-diglyceride synthetase | 0.865 | 0.9970089730807579 | 0.975 | 0.6651147322913203 | 0.8755309263430195 | 0.1516980417169131 | ||
CAC1793 | lexA P-loop ATPase domain fused to LexA-like protein | 0.832 | 1.2658227848101264 | 0.59 | 1.1560693641618498 | 0.9609730372429941 | 0.3083563869215553 | ||
CAC1794 | Predicted permease | 0.9045000000000001 | 0.9722897423432183 | 1.7275 | 1.156737998843262 | 1.1902569352966201 | 0.37368451620181176 | ||
CAC1795 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 0.9105000000000001 | 0.8554319931565441 | 1.7565 | 1.0559662090813096 | 1.1445995505594635 | 0.4166127318720296 | ||
CAC1796 | Predicted membrane-associated Zn-dependent protease | 0.988 | 0.9478672985781991 | 1.387 | 0.9881422924901185 | 1.0777523977670793 | 0.20703436296969724 | ||
CAC1797 | gcpE 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | 1.1084999999999998 | 1.1068068622025458 | 1.526 | 1.2658227848101264 | 1.251782411753168 | 0.1974336827602271 | ||
CAC1798 | hypothetical protein | 1.096 | 0.9017132551848512 | 2.5265 | 1.13314447592068 | 1.4143394327763827 | 0.7483531526983616 | ||
CAC1799 | nusA transcription elongation factor NusA | 1.0425 | 0.8688097306689835 | 2.4665 | 1.2062726176115803 | 1.396020587070141 | 0.7268329835686602 | ||
CAC1800 | Uncharacterized conserved protein, YLXR B,subtilis homolog | 1.2879999999999998 | 1.0282776349614395 | 2.3335 | 0.9407337723424272 | 1.3976278518259666 | 0.6411049644140031 | ||
CAC1801 | hypothetical protein | 1.009 | 0.8093889113719142 | 2.9475 | 0.9620009620009621 | 1.431972468343219 | 1.013938346312816 | ||
CAC1802 | infB translation initiation factor IF-2 | 0.8975 | 0.8193363375665711 | 2.0905 | 1.2040939193257074 | 1.2528575642230697 | 0.5825925951269586 | ||
CAC1803 | rfbA ribosome-binding factor A | 0.9994999999999999 | 0.9178522257916474 | 1.96 | 1.1554015020219528 | 1.2581884319534 | 0.4781398219697675 | ||
CAC1804 | Exopolyphosphatase family protein | 0.876 | 0.8382229673093042 | 1.4725 | 1.2547051442910915 | 1.110357027900099 | 0.30603054009187786 | ||
CAC1805 | truB tRNA pseudouridine synthase B | 0.852 | 0.8087343307723414 | 1.36 | 1.1764705882352942 | 1.0493012297519089 | 0.2642637443395098 | ||
CAC1806 | hypothetical protein | 0.8115 | 0.7942811755361399 | 1.267 | 1.1299435028248588 | 1.0006811695902496 | 0.23524805539199434 | ||
CAC1807 | rpsO Ribosomal Protein S15 | 0.612 | 0.8080808080808081 | 1.1895 | 0.9675858732462506 | 0.8942916703317646 | 0.2447045143263818 | ||
CAC1808 | pnpA polyribonucleotide nucleotidyltransferase | 0.5575 | 0.7651109410864576 | 1.4485000000000001 | 1.0559662090813093 | 0.9567692875419418 | 0.3863452724173449 | ||
CAC1809 | Uncharacterized conserved protein, YLMC B,subtilis ortholog | 0.5825 | 0.6565988181221273 | 1.389 | 0.9930486593843098 | 0.9052868693766092 | 0.36865414433293336 | ||
CAC1810 | dapG aspartate kinase I | 0.599 | 0.6555227794165847 | 1.216 | 1.0718113612004287 | 0.8855835351542534 | 0.3049119640088163 | ||
CAC1811 | Periplasmic serine protease, YMFB B,subtilis ortholog | 0.6695 | 0.7249003262051467 | 1.09 | 1.0678056593699947 | 0.8880514963937853 | 0.22171890471642405 | ||
CAC1812 | Sporulation protein SpoIIIE, DNA segregation ATPase | 0.629 | 0.6305170239596469 | 1.1 | 0.9195402298850576 | 0.8197643134611762 | 0.23143957698292134 | ||
CAC1813 | Predicted Fe-S oxidoreductase | 0.9710000000000001 | 0.970873786407767 | 2.003 | 1.596169193934557 | 1.385260745085581 | 0.5064295532777198 | ||
CAC1814 | pgsA Phosphatidylglycerophosphate synthase | 0.8375 | 0.8771929824561404 | 1.3090000000000002 | 1.1904761904761905 | 1.0535422932330827 | 0.2322232288393441 | ||
CAC1815 | recA recombinase A | 0.89 | 0.8227067050596463 | 0.955 | 0.7089684509039348 | 0.8441687889908952 | 0.10507744715495373 | ||
CAC1816 | hypothetical protein | 1.3615 | 0.9203865623561895 | 2.693 | 1.2515644555694618 | 1.5566127544814128 | 0.7804449993334747 | ||
CAC1817 | Stage V sporulation protein, spoVS | 0.8280000000000001 | 0.7147962830593281 | 2.5175 | 1.8083182640144664 | 1.4671536367684486 | 0.8552153227330505 | ||
CAC1818 | hypothetical protein | 1.032 | 0.7309941520467836 | 2.2775 | 0.8602150537634408 | 1.225177301452556 | 0.7123002548245992 | ||
CAC1819 | aspB aspartate aminotransferase | 1.123 | 0.9225092250922509 | 1.3094999999999999 | 1.4727540500736376 | 1.206940818791472 | 0.23743241292944178 | ||
CAC1820 | Phosphocarrier Protein (Hpr) | 1.001 | 1.0040160642570282 | 0.8675 | 1.0188487009679064 | 0.9728411913062336 | 0.07065939131173787 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |