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Quantification and normalization are performed according to the SOPs | |||||||||
Data are normaliezd to sample 1. | |||||||||
The treshold for induction is 0.8, for repression -0.8. | |||||||||
Protein_UniProt | Protein-IDs from the UniProt-Database | ||||||||
Protein_SubtiList | gene-names from SubtiList | ||||||||
Ratio | ratio of native protein in comparision to heavy labeled standard protein mixture | ||||||||
RSD | relative standard deviation | ||||||||
Peptides | identified peptides used for quantification | ||||||||
Experiment Name: | 090204_batchfermentation_exp-starv01 | ||||||||
used SOP: | SOP_quant-Proteomics_SysMo_090505 | ||||||||
owner | Kuehnel, Sandra | ||||||||
Seek-ID | 289 | ||||||||
For empty cell no data are available due to missing identification or quantification in the sample | |||||||||
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Project | Sample ID | Sample | Sample | SEEK STRAIN ID | Treatment 1 | Treatment 2 | time after treatment | Cell culture ID | Cell culture Type | Cell culture | Cell culture | Sample | Sample | Sample | |||||||||||||||||||
name | (unique in whole BaCell, to use in all data sheets with measurements | Â Â Â lab_internal_number | Organism_part | growhth rate | concentration | Â lab_internal_number | Sampling date | Age_at_sampling_hours | comments | ||||||||||||||||||||||||
Strain | glucose | Culture description | Culture_start_date | Creator | |||||||||||||||||||||||||||||
value | Unit | value | SD | Unit | h | Date_at_sampling | Age_at_sampling_hours | Description | |||||||||||||||||||||||||
date | hour | ||||||||||||||||||||||||||||||||
BaCell | sample 1 | sample 1 | whole cell | 45 | Batch | 7.313327484738115 | g/l | -6.68333 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 5 | |||||||||||||||||||
BaCell | sample 2 | sample 2 | whole cell | 45 | Batch | 7.373757032013908 | g/l | -5.68333 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 6 | |||||||||||||||||||
BaCell | sample 3 | sample 3 | whole cell | 45 | Batch | 7.273686594449334 | g/l | -4.68333 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 7 | |||||||||||||||||||
BaCell | sample 4 | sample 4 | whole cell | 45 | Batch | 7.2996478001277785 | g/l | -3.6833299999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 8 | |||||||||||||||||||
BaCell | sample 5 | sample 5 | whole cell | 45 | Batch | 7.148627101537788 | g/l | -2.6833299999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 9 | |||||||||||||||||||
BaCell | sample 6 | sample 6 | whole cell | 45 | Batch | 6.820560170028125 | g/l | -1.6833299999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 10 | |||||||||||||||||||
BaCell | sample 7 | sample 7 | whole cell | 45 | Batch | 6.499902192462649 | g/l | -1.1833299999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 10.5 | |||||||||||||||||||
BaCell | sample 8 | sample 8 | whole cell | 45 | Batch | 5.7358432322795485 | g/l | -0.6833299999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 11 | |||||||||||||||||||
BaCell | sample 9 | sample 9 | whole cell | 45 | Batch | 4.666975758290997 | g/l | 2.9999999995311555E-6 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 11.683333 | |||||||||||||||||||
BaCell | sample 10 | sample 10 | whole cell | 45 | Batch | 3.0201944509078364 | g/l | 0.5000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 12.183333 | |||||||||||||||||||
BaCell | sample 11 | sample 11 | whole cell | 45 | Batch | 1.7560740946620574 | g/l | 1.0000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 12.683333 | |||||||||||||||||||
BaCell | sample 12 | sample 12 | whole cell | 45 | Batch | 1.2176263811134527 | g/l | 1.5000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 13.183333 | |||||||||||||||||||
BaCell | sample 13 | sample 13 | whole cell | 45 | Batch | 0 | g/l | 2.0000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 13.683333 | |||||||||||||||||||
BaCell | sample 14 | sample 14 | whole cell | 45 | Batch | 0 | g/l | 2.5000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 14.183333 | |||||||||||||||||||
BaCell | sample 15 | sample 15 | whole cell | 45 | Batch | 0 | g/l | 3.0000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 14.683333 | |||||||||||||||||||
BaCell | sample 16 | sample 16 | whole cell | 45 | Batch | 0 | g/l | 3.5000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 15.183333 | |||||||||||||||||||
BaCell | sample 17 | sample 17 | whole cell | 45 | Batch | 0 | g/l | 4.0000029999999995 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 15.683333 | |||||||||||||||||||
BaCell | sample 18 | sample 18 | whole cell | 45 | Batch | 0 | g/l | 5.000002999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 16.683332999999998 | |||||||||||||||||||
BaCell | sample 19 | sample 19 | whole cell | 45 | Batch | 0 | g/l | 6.000002999999998 | Batchfermentation_Exp-Starv01 | batch | 2009-02-04T0:0:0+0000 | Praveen Kumar Sappa | 2009-02-04T0:0:0+0000 | 17.683332999999998 | |||||||||||||||||||