Projects: Not specified
Institutions: Not specified
I am performing research in biomarkers discovery, particularly regarding liver fibrosis in non-alcoholic fatty liver disease. My research activities involved the use of bioinformatic platforms, the analysis of biological protein-protein interaction networks and the experimental validation of candidates by ELISA.
Projects: MESI-STRAT, PoLiMeR - Polymers in the Liver: Metabolism and Regulation
Institutions: University of Groningen
Prof. Dr. Kathrin Thedieck
MESI-STRAT Coordinator
Leader WP8 – Project Coordination
Projects: SBEpo - Systems Biology of Erythropoietin
Institutions: German Cancer Research Center (DKFZ)

Roles: PhD Student
Expertise: Mathematical modelling, Single Cell analysis, Cell biology, Molecular Biology
Tools: Biochemistry, Systems Biology, Matlab, R
Projects: The Hedgehog Signalling Pathway (LiSyM-JGMMS)
Institutions: Universität Leipzig - Medizinische Fakultät - Institut für Biochemie
Expertise: Biochemistry, Cell biology, Molecular Biology
Tools: Biochemistry
Expertise: chromatin, Epigenetics, nuclear organisation, DNA repair
Tools: Biochemistry, Systems Biology, Cell biology, quantitative microscopy
POSITION
I am an emeritus professor in Biochemistry at the University of Amsterdam (retired 2010).
RESEARCH
My research focussed on the human chromatin in its natural environment, i.e. the nucleus of cultured living human cells.
Aspects, such as the dynamic folding of the chromatin fiber inside the nucleus and local chemical modification of histones and DNA at genetic loci, are the physical and chemical basis for epigenetic regulation of gene expression. In my group we worked parallel on human
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Projects: FAIRDOM user meeting
Institutions: KAIST
Roles: PhD Student
Expertise: Cell biology, Molecular Biology, Cancer, Stem cell
Tools: Boolean modeling, Systems Biology
Expertise: Microbiology, genetic engineering, Fermentation, Cell biology, Metabolic Engineering
Research Scientist in the Biotechnology and Nanomedicine department at the non-profit research institution, SINTEF, in Norway.
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: Max-Planck Institute for Molecular Genetics
Expertise: Cell biology, Molecular Biology, Transcriptomics, Proteomics
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: University of Tokyo
Roles: Postdoc
Expertise: Genetic interaction, Cell biology, Image analysis, Phenome, Genetics, Genomics
Tools: Model selection, Fluorescence microscopy, CalMorph, R, Java, GLM
I am a postdoc in The University of Tokyo. My research interest is to know structure of biological systems by functional relationships between genes working in response to endogenous and/or exogenous disruptions. I'm trying to find functional relationships between genes by similarity of phenotype defined with high-dimensional morphological features in yeast gene deletion collection. I'm happy if you will talk with me in any topics.
Projects: ICYSB 2015 - International Practical Course in Systems Biology
Institutions: Åbo Akademi University
Projects: Not specified
Institutions: Not specified
Expertise: Signalling networks
Tools: quantitative western blot analyses, qRT-PCR, Cell biology, Cell and tissue culture
Projects: SysMO-LAB
Institutions: Wageningen University & Research
Expertise: Reactor models, dynamics of biological networks., Mathematical modelling, Bioinformatics
Tools: SQL, Material balance based modeling, Mathematica, Matlab, Copasi, JWS Online, Algebraic equations, Linear equations, ODE, Partial differential equations, SBML, Metabolomics, Model organisms, Cell biology, Computational and theoretical biology, Molecular Biology
I'm a modeller, specialized in kinetic modeling of biochemical networks. My focus in the SysMO-LAB consortium is on creating models of Lactococcus lactis glycolysis and couple this to other related lactic acid bacteria like Streptococcus pyogenes and Enterococcus faecalis. Besides kinetic modeling, I'm also interested in combining various modeling techniques (genome-scale modeling, qualitative modeling).
Projects: BaCell-SysMO
Institutions: University of Newcastle
Expertise: Genetics), Systems Biology, Gram positive bacteria (Bacillus, Molecular Biology, Microbiology
Tools: molecular biological techniques (RNA/DNA techniques), protein interaction studies, DNA technology RNA technology Protein analysis Fermentation Mutagenesis, gene regulation, Proteomics (2D-PAGE), Model organisms, Proteomics, Transcriptomics, Genetic analysis, Genomics, Cell biology, Biochemistry and protein analysis, Molecular Biology, Microbiology
Optimisation of Bacillus subtilis for the secretion of heterologous proteins Therapeutic proteins (including those required for experimental purposes and clinical trials) are major products of biomanufacturing processes and considerable time and expense are expended to maximise the yield and quality of proteins produced in heterologous hosts. The production host of choice is the Gram-negative bacterium Escherichia coli for which many strains and expression systems have been developed. However,
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Projects: BaCell-SysMO
Institutions: University of Erlangen-Nuernberg
Expertise: Cell physiology, regulation of gene expression, quantative biology, Protein-DNA-interaction, Microbiology/ Protein chemistry/ Molecular Biology, Bacterial Cell Biology, carbon metabolism, bacterial metabolism, functional protein expression, Bacillus subtilis
Tools: surface plasmon resonance spectroscopy, reporter gene analysis, DNA, Molecular biology techniques (RNA/DNA/Protein), Chromatography, Model organisms, Cell biology, Biochemistry and protein analysis, Microbiology