Presentations
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Poster presented at SWAT4LS - Semantic web applications and tools for life science- in Berlin at 10 of december 2014 by Olga Krebs
Creators: Olga Krebs, Carole Goble, Bernd Rinn, Wolfgang Müller, Quyen Nguyen, Jacky Snoep, Stuart Owen, Natalie Stanford, Peter Kunszt
Submitter: Olga Krebs
Presentation of JERM templates at SEEK Users WS 2012 in Berlin (Olga Krebs)
Creator: Olga Krebs
Submitter: Olga Krebs
Talk given by Sergey Lashin from Institute of Cytology and Genetics, Novosibirsk, Russia
Creators: Sergey Lashin, Alexandra Klimenko
Submitter: Olga Krebs
A personal view of the big picture in Research Data Management, given at GFBio - de.NBI Summer School 2018 Riding the Data Life Cycle! Braunschweig Integrated Centre of Systems Biology (BRICS), 03 - 07 September 2018
Creator: Carole Goble
Submitter: Carole Goble
Presented by Yannick Wurm at the first FAIRDOM user meeting.
Creators: Natalie Stanford, Yannick Wurm
Submitter: Natalie Stanford
Poster presented in Protein Engineering Congress EU
Creators: Ioannis Pavlidis, Eleni Konia, Nikolaos Kaloudis
Submitter: Ioannis Pavlidis
This presentation gives an overview of the way we structure and share data in the SEEK using JERM templates, and how we use the ISA hierarchy of Investigations, Studies, and Assays to associate experiments and data sets together. These slides were presented at the SEEK Users meeting in Berlin 2012.
Creator: Katy Wolstencroft
Submitter: Katy Wolstencroft
Olga's presentation at SySMO PALs meeting 29 – 30 November 2012, Heidelberg
Creators: Olga Krebs, PALs
Submitter: Olga Krebs
Poster presented during the ICSB 2011 conference in Mannheim
Creators: Abeer Fadda, Christine Clayton
Submitter: Abeer Fadda
How do you communicate a complex research endeavour in simple words and pictures using only two minutes? In my case that turned out to be scientifically impossible, but we managed to shave it down to three. This poster shows and tells how we went about it.
Creator: Jon Olav Vik
Submitter: Jon Olav Vik
Issues and considerations for data management as SysMO projects approach the end of their funding
Creator: Katy Wolstencroft
Submitter: Katy Wolstencroft
Presentation by Thomas Millat of a tool for automatized analysis of flow cytometry data. It allows characterisation of different growth modalities, statistical measures of mean and variance and estimation of population overlap all along with appropriate visualization.
Creator: Thomas Millat
Submitter: Ulf Liebal
The talk shows that proline biosynthesis and accumulation is connected to glycine betaine availability. Glycine betaine complements proline function.
Creator: Tamara Hoffmann
Submitter: Ulf Liebal
Lecture 1: Being FAIR: FAIR data and model management In recent years we have seen a change in expectations for the management of all the outcomes of research – that is the “assets” of data, models, codes, SOPs, workflows. The “FAIR” (Findable, Accessible, Interoperable, Reusable) Guiding Principles for scientific data management and stewardship [1] have proved to be an effective rallying-cry. Funding agencies expect data (and increasingly software) management retention and access plans. Journals ...
Creator: Carole Goble
Submitter: Carole Goble
Lecture 2: Being Reproducible: Models, Research Objects and R* Brouhaha Reproducibility is a R* minefield, depending on whether you are testing for robustness (rerun), defence (repeat), certification (replicate), comparison (reproduce) or transferring between researchers (reuse). Different forms of "R" make different demands on the completeness, depth and portability of research. Sharing is another minefield raising concerns of credit and protection from sharp practices. In practice the exchange, ...
Creator: Carole Goble
Submitter: Carole Goble
Presentation given by Colin Harwood presenting results about ITC experiments to confirm interactions. Preliminary crystallisation experiments commenced on suitable candidates.
Creator: Colin Harwood
Submitter: Ulf Liebal
Presented by MARTIN SCHARM at SySMO PALs meeting 29-30 November 2012 in Heidelberg
Creators: Olga Krebs, MARTIN SCHARM
Submitter: Olga Krebs
This presentation reports about the results from an investigation of a ClosTron-mutant lacking CoA-transferase activity. Using our two-population model developed for the wild type of C. acetobutylicum, we analyse the changes in the formation of products caused by that mutation. In particular, we focus on the investigation of the acid re-assimilation after the initiation of the pH shift. Our comparison of experimental data and simulation unravels that an CoA-independent re-assimilation mechanism ...
Creator: Thomas Millat
Submitter: Thomas Millat
Written and presented by Mihai Glont (EMBL-EBI, UK), at the Reproducible and Citable Data and Model Workshop, September 14th -16th 2015.
Creators: Natalie Stanford, Mihai Glont (EMBL-EBI, UK)
Submitter: Natalie Stanford
Creator: Caterina Barillari (ETH Zuerich SIS)
Submitter: Carsten Fortmann-Grote