Models

What is a Model?
418 Models visible to you, out of a total of 662

The new GEM of S. coelicolor developed by Tjasa Kumelj, Snorre Sulheim, Alexander Wentzel and Eivind Almaas in 2017/2018

Creators: Snorre Sulheim, Tjasa Kumelj

Submitter: Snorre Sulheim

No description specified

Creators: Dawie van Niekerk, Jacky Snoep

Submitter: Dawie van Niekerk

(Abudulikemu et al 2000 (also 2018) Standard model of acute mode Figure 32.

Creators: Hans V. Westerhoff, Ablikim Abudukelimu

Submitter: Hans V. Westerhoff

Model that can be used to obtain the figures of Abudulikemu et al 2018: Abudukelimu, A., Barberis, M., Redegeld, F.A., Sahin, N., and Westerhoff, H.V. (2018). Predictable Irreversible Switching Between Acute and Chronic Inflammation. Front Immunol 9, 1596.

Creators: Hans V. Westerhoff, Ablikim Abudukelimu

Submitter: Hans V. Westerhoff

Butanol producing iNS142, redesigned using RobOKoD.

Creator: Natalie Stanford

Submitter: Natalie Stanford

Originally submitted model file for PLaSMo accession ID PLM_62, version 1

Creators: BioData SynthSys, Martin Beaton

Submitter: BioData SynthSys

The relation of the interferon 2 pathway and SARS-CoV-2.

Creators: Anna Niarakis, Vidisha Singh, Sara Sadat AGHAMIRI

Submitter: Marek Ostaszewski

The Interferon-lambda (IFNL) map describes the action of the drug candidate IFNL on intra- and intercellular signal transduction under SARS-CoV-2.

Creators: Marius Rameil, Vanessa Nakonecnij, Marta Conti

Submitter: Marek Ostaszewski

The Folder contains:

  • The MCMC and simulation results, as well as the synthetic data of the Chemical Reaction Network model (DoubleDecayIndep)
  • The MCMC and simulation results, as well as the synthetic data of the Lotka-Volterra model (LotkaVolterraJoint)

Together with an executable ipynb script (Exe.ipynb) and the MCMC plotting and execution functions (MCMCFunctions.py).

Creator: Vincent Wagner

Submitter: Vincent Wagner

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