Models

What is a Model?
418 Models visible to you, out of a total of 662

From published files, Uriel Urquiza created SBML models with all 8 parameter sets published, and versions of F2014.1 to simulate multiple clock mutants, using SloppyCell

Originally submitted model file for PLaSMo accession ID PLM_1030, version 1

F2014.1.2 SBML file including Stepfunction imported back into Copasi v4.8

Creators: Andrew Millar, Karl Fogelmark, Carl Troein

Submitter: Andrew Millar

F2014.1.1 becomes the published version, with SBML file originally created from SloppyCell by Uriel Urquiza - see separate file. then Andrew Millar converted into SBML L2V4 in Copasi and added ISSF for light input, using SBSI Stepfunction editor (see Adams et al. 2011 J Biol Rhythms).

Creators: Andrew Millar, Karl Fogelmark, Carl Troein

Submitter: Andrew Millar

Mathematical model for FBPAase kinetics, saturation with DHAP and GAP

Creator: Jacky Snoep

Submitter: Jacky Snoep

No description specified

Creators: Alexey Kolodkin, Hans V. Westerhoff, Raju Prasad Sharma

Submitter: Alexey Kolodkin

Mechanistical model of the catalytic cycle of Trypanothione Synthetase

Creators: Jurgen Haanstra, Alejandro Leroux

Submitter: Jurgen Haanstra

No description specified

Creators: Dawie van Niekerk, Jacky Snoep

Submitter: Dawie van Niekerk

No description specified

Creators: Dawie van Niekerk, Jacky Snoep

Submitter: Dawie van Niekerk

Model associated with the following:

Hannah A Kinmonth-Schultz, Melissa J S MacEwen, Daniel D Seaton, Andrew J Millar, Takato Imaizumi, Soo-Hyung Kim, An explanatory model of temperature influence on flowering through whole-plant accumulation of FLOWERING LOCUS T in Arabidopsis thaliana, in silico Plants, Volume 1, Issue 1, 2019, diz006, https://doi.org/10.1093/insilicoplants/diz006

Creator: Hannah Kinmonth-Schultz

Submitter: Hannah Kinmonth-Schultz

Framework Model for Arabidopsis vegetative growth, version 2 (FMv2), as described in Chew et al. bioRxiv 2017 (https://doi.org/10.1101/105437; please see linked Article file).

The FMv2 model record on FAIRDOMHub has the following versions, which represent the same FMv2 model: Version 1 is an archive of the github repository of MATLAB code for the Framework Model v2, downloaded from https://github.com/danielseaton/frameworkmodel on 06/02/17. This version was not licensed for further use and was ...

Creators: Daniel Seaton, Yin Hoon Chew, Andrew Millar

Submitter: Daniel Seaton

No description specified

Creator: Jacky Snoep

Submitter: Jacky Snoep

The FEM models how metabolic slowdown will induce the age-related changes of weight gain, insulin resistance, basal inflammation, mitochondrial dysfunction, as well as the age-related disease of atherosclerosis, via a series of unavoidable homeostatic shifts.

Creators: James Wordsworth, Pernille Yde Nielsen

Submitter: James Wordsworth

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