Data files

1048 Data files visible to you, out of a total of 1574
No description specified

Creator: Sebastian Curth

Contributor: Sebastian Curth

Out

Creator: Sebastian Curth

Contributor: Sebastian Curth

Simulation results of temperature degradation of gluconeogenic intermediates

Creators: Jacky Snoep, Theresa Kouril

Contributor: Jacky Snoep

Experimental data for determination of half-life of gluconeogenic intermediates (BPG, GAP and DHAP).

Creators: Jacky Snoep, Theresa Kouril

Contributor: Jacky Snoep

MIAPE based Gel Electrophoresis Data Entry Worksheet

Creators: Olga Krebs, Holger Janssen

Contributor: Olga Krebs

No description specified

Creator: Quyen Nguyen

Contributor: Quyen Nguyen

No description specified

Creator: Quyen Nguyen

Contributor: Quyen Nguyen

test file

Creators: Olga Krebs, Vânia Pobre

Contributor: Olga Krebs

test file

Creators: Olga Krebs, Vânia Pobre

Contributor: Olga Krebs

test file

Creators: Olga Krebs, Vânia Pobre

Contributor: Olga Krebs

test file

Creators: Olga Krebs, Vânia Pobre

Contributor: Olga Krebs

Recent studies revealed the unsuspected complexity of the bacterial transcriptome but its systematic analysis across many diverse conditions remains a challenge. Here we report the condition-dependent transcriptome of the prototype strain B. subtilis 168 across 104 conditions reflecting the bacterium's life-styles. This data set composed of 269 tiling array hybridizations allowed to observe ~85% of the annotated CDSs expressed in the higher 30% in at least one hybridization and thus provide an
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Creators: Leif Steil, Ulrike Mäder, Colin Harwood, Rick Lewis, Ruben Mars, Priyanka Nannapaneni, Praveen Kumar Sappa, Joerg Stuelke, Jan Maarten Van Dijl, Michael Hecker, Uwe Voelker

Contributor: Leif Steil

Heterologous Expression of LDHs from different lactic acid bacteria in Escherichia coli DH5α.

Assessment of kinetic parameters of LDH to include in a catabolic model.

Creators: Silvio Hering, Tomas Fiedler

Contributor: Silvio Hering

TOK1 TRK1 TRK2

Creator: Silvia Petrezselyova

Contributor: JERM

How to get to the hotel from rail station

Creator: Olga Krebs

Contributor: Olga Krebs

No description specified

Creator: Sebastian Curth

Contributor: Sebastian Curth

Kinetic characterisation of TPI. Experimental data for enzyme reaction rates with increasing concentrations of DHAP and GAP, and inhibition with 3PG and PEP.

Creators: Jacky Snoep, Theresa Kouril

Contributor: Jacky Snoep

Experimental data set for the kinetic characterisation of TPI

Creators: Dawie Van Niekerk, Jacky Snoep

Contributor: Dawie Van Niekerk

Simulation results of TPI experimental data for GAP and DHAP saturation.

Creators: Jacky Snoep, Theresa Kouril

Contributor: Jacky Snoep

No description specified

Creator: Praveen Kumar Sappa

Contributor: JERM

No description specified

Creators: Ulrike Mäder, Joerg Stuelke, Praveen Kumar Sappa, Martin Lehnik-Habrink, Marc Schaffer

Contributor: Praveen Kumar Sappa

Mutants with defects in glucose transport systems were analyzed in a bioreactor and the transcription of certain uptake systems analyzed. Transcription profiles between batch and chemostat conditions were compared

Creator: Sonja Steinsiek

Contributor: Sonja Steinsiek

Transcription of glucose uptake transport systems in a mutant background under aerobic batch conditions.

Creator: Sonja Steinsiek

Contributor: Sonja Steinsiek

Transcription of glucose uptake transport systems in a mutant background under anaerobic batch conditions.

Creator: Sonja Steinsiek

Contributor: Sonja Steinsiek

Micro array analysis of steady-state growing cells of Clostridium acetobutylicum at pH 5.7 (acidogenesis) in comparison to pH 4.5 (solventogenesis).

Creator: Holger Janssen

Contributor: Holger Janssen

Micro array analyses of all mRNA levels of cells growing at steady state pH values 5.7, 5.5, 5.3, 5.1, 4.9, 4.7 compared to the same reference steady-state pH 4.5.

Creator: Holger Janssen

Contributor: Holger Janssen

This template is for recording gene expression data from the NimbleGen platform.
This template was taken from the GEO website (http://www.ncbi.nlm.nih.gov/geo/info/spreadsheet.html) and modified to conform to the SysMO-JERM (Just enough Results Model) for transcriptomics.
Using these templates will mean easier submission to GEO/ArrayExpress and greater consistency of data in SEEK.

Creator: Katy Wolstencroft

Contributor: Katy Wolstencroft

RNAseq analysis of S. solfataricus grown on either L-fucose or D-glucose

Creators: Jacqueline Wolf, Theresa Kouril, Andreas Albersmeier, Jörn Kalinowski

Contributor: Jacqueline Wolf

An example template for MAGE-TAB compliant transcriptomics data. This example only covers the Investigation Description Format (IDF) and the Sample and Data Relationship Format (SDRF) worksheets (i.e. the metadata from a microarray experiment).
This template was generated automatically using the ArrayExpress submission help tool (http://www.ebi.ac.uk/cgi-bin/microarray/magetab.cgi)

Creator: Katy Wolstencroft

Contributor: Katy Wolstencroft

Please fill in thistravel expense reimbursement report and send it together with original receipts to HITS

Creator: Olga Krebs

Contributor: Olga Krebs

TRK1, TRK2

Creator: Silvia Petrezselyova

Contributor: JERM

All datapoints that were measured are displayed together with the accompanying simulations by the computational model

Creators: Jurgen Haanstra, Alejandro Leroux

Contributor: Jurgen Haanstra

An extended model description of the TryS model

Creators: Jurgen Haanstra, Alejandro Leroux

Contributor: Jurgen Haanstra

The tutorial provided for EraSysAPP PALs. Covers new features associated with generating snapshots, research objects, and assigning DOIs to investigation snapshots in order to make them citable structures.

Creator: Natalie Stanford

Contributor: Natalie Stanford

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