Data files

1048 Data files visible to you, out of a total of 1574

FBA result of flux distribution in butanol producing e.coli strain, which designed using RobOKoD.

Creator: Natalie Stanford

Contributor: Natalie Stanford

Kinetic characterisation of FBPAase. Expermental data for enzyme reaction rates with increasing concentrations of DHAP and GAP.

Creators: Jacky Snoep, Theresa Kouril

Contributor: Jacky Snoep

Simulation results of FBPAase of experimental data for DHAP and GAP saturation

Creator: Jacky Snoep

Contributor: Jacky Snoep

No description specified

Creator: Thomas Rimpf

Contributor: Thomas Rimpf

No description specified

Creator: Thomas Rimpf

Contributor: Thomas Rimpf

No description specified

Creator: Thomas Rimpf

Contributor: Thomas Rimpf

No description specified

Creator: Thomas Rimpf

Contributor: Thomas Rimpf

acetic acid addition 70mM

Creator: Sebastian Curth

Contributor: Sebastian Curth

pulse acetic acid: 70mM (2x), 80mM,
shift to 4.5,
pulse acetic acid: 70mM

Creator: Sebastian Curth

Contributor: Sebastian Curth

acetic acid addition

step experiment:
50mM, 70mM, 100mM, 120mM

pulse
200mM

Creator: Sebastian Curth

Contributor: Sebastian Curth

acetic acid pulse 100mM
acetic acid step 50mM, 70mM

Creator: Sebastian Curth

Contributor: Sebastian Curth

No description specified

Creator: Thomas Rimpf

Contributor: Thomas Rimpf

This .csv file contains the filtered datset of the anaerobic to aerobic transition. Values are shown if they show a statistically significant change relative to the 0 minute transcriptional profile (t-test p<0.05 and 2-fold cut-off).

Creator: Matthew Rolfe

Contributor: JERM

This .csv file contains the filtered datset of the aerobic to anaerobic transition. Values are shown if they show a statistically significant change relative to the 0 minute transcriptional profile (t-test p<0.05 and 2-fold cut-off).

Creator: Matthew Rolfe

Contributor: JERM

Excel sheet contains:

- flux distribution solution from best iteration cluster
- quality of the fit (experimental MIDs vs. simulated MIDs)
- Sensitivity analysis for 95% flux parameter confidence interval using a Monte-Carlo approach

Creator: Michael Kohlstedt

Contributor: Michael Kohlstedt

Excel sheet contains:

- flux distribution solution from best iteration cluster
- quality of the fit (experimental MIDs vs. simulated MIDs)
- Sensitivity analysis for 95% flux parameter confidence interval using a Monte-Carlo approach

Creator: Michael Kohlstedt

Contributor: Michael Kohlstedt

Excel sheet contains:

- flux distribution solution from best iteration cluster
- quality of the fit (experimental MIDs vs. simulated MIDs)
- Sensitivity analysis for 95% flux parameter confidence interval using a Monte-Carlo approach

Creator: Michael Kohlstedt

Contributor: Michael Kohlstedt

This .csv file shows FNR activity at different aerobiosis levels

Columns
a_old Desired aerobiosis level (Aerobiosis units or %AAU)
Bgal_activity Average FNR reporter activity (Miller units)
Bgal_STDEV STDEV of FNR reporter activities (Miller units)
rDOT(μM) Dissolved oxygen tension (μM)
DCW DCW (g/L)
[acetate] Extracellular acetate concentration (mM)
Qacetate Acetate flux (mmoles/h/gDCW)
a_new Actual aerobiosis level in sampled chemostat

Creator: Matthew Rolfe

Contributor: JERM

A .pdf files showing graphs of FNR activity at varying aerobiosis levels

Top graph shows no acetate re-calibration
Bottom graph shows data with acetate re-calibration

Creator: Matthew Rolfe

Contributor: JERM

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